RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 TPM1P09493 284 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 OSBP2Q969R2 916 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 M0R2C6 588 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 CLSTN1O94985 981 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 WTAPQ15007 396 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 ANKIB1Q9P2G1 1089 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 ZNF532Q9HCE3 1301 aa20.47■□□□□ 0.87
TRAF3IP1-201ENST00000373327 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 TOB2Q14106 344 aaPredicted RBP20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 TTF1Q15361 905 aaPredicted RBP20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 DDB1Q16531 1140 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 APPBP2Q92624 585 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 IFNKQ9P0W0 207 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
TRAF3IP1-201ENST00000373327 MAST3O60307 1309 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 AIFM3Q96NN9 605 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CTAGE5O15320 804 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PHKA1P46020 1223 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 TSR1Q2NL82 804 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 HS1BP3Q53T59 392 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PYCARDQ9ULZ3 195 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 KCNJ14Q9UNX9 436 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 COL9A3Q14050 684 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 MAP7D2Q96T17 732 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PUS7LQ9H0K6 701 aaKnown RBP20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 MTX1Q13505 466 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ZSWIM4Q9H7M6 989 aa20.44■□□□□ 0.86
TRAF3IP1-201ENST00000373327 STX17P56962 302 aa20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 USP5P45974 858 aa20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 URI1O94763 535 aaPredicted RBP20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 RTN1Q16799 776 aa20.43■□□□□ 0.86
TRAF3IP1-201ENST00000373327 HLFQ16534 295 aa20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 USP32Q8NFA0 1604 aa20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 TOP1P11387 765 aaKnown RBP20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PDIA3P30101 505 aaKnown RBP20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 DZIP1Q86YF9 867 aaKnown RBP20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ANKRD20A12PQ8NF67 263 aa20.42■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 IQCA1Q86XH1 822 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 KCNG4Q8TDN1 519 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 MKNK2Q9HBH9 465 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ZPR1O75312 459 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 FAM160A1Q05DH4 1040 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 UTP14AQ9BVJ6 771 aaKnown RBP20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 RICTORQ6R327 1708 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 PDIA6Q15084 440 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SEC31BQ9NQW1 1179 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 BCAMP50895 628 aa20.41■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ANKARQ7Z5J8 1434 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 NSUN7Q8NE18 718 aaKnown RBP20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 STX8Q9UNK0 236 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CLIC4Q9Y696 253 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 TECPR2O15040 1411 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 TSPY2A6NKD2 308 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SCARF1Q14162 830 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 STAMQ92783 540 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 MRVI1Q9Y6F6 885 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SPATA31D1Q6ZQQ2 1576 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 UBASH3AP57075 661 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CEP135Q66GS9 1140 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 CTCFLQ8NI51 663 aaPredicted RBP20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ANGEL1Q9UNK9 670 aaKnown RBP20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 ZNF652Q9Y2D9 606 aa20.4■□□□□ 0.86
TRAF3IP1-201ENST00000373327 NLRP5P59047 1200 aa20.39■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SDR42E1Q8WUS8 393 aa20.39■□□□□ 0.86
TRAF3IP1-201ENST00000373327 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.86
TRAF3IP1-201ENST00000373327 DYNC1I1O14576 645 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 PIGBQ92521 554 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 DHX58Q96C10 678 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 PPFIBP1Q86W92 1011 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 WASF1Q92558 559 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 RIOK3O14730 519 aaKnown RBP20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 ZNF75DP51815 510 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 SMIM5Q71RC9 77 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 PLIN2Q99541 437 aa20.39■□□□□ 0.85
TRAF3IP1-201ENST00000373327 IKQ13123 557 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms