RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 IFNL2Q8IZJ0 200 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 TTC5Q8N0Z6 440 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 ZBTB3Q9H5J0 574 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 CYP46A1Q9Y6A2 500 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 OVOS2A0A0G2JMS6 1433 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 ZNF609O15014 1411 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 JAK2O60674 1132 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 MBD3O95983 291 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 TIMM10P62072 90 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 VPS53Q5VIR6 699 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 LMBR1LQ6UX01 489 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 ERC1Q8IUD2 1116 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 C17orf53Q8N3J3 647 aaPredicted RBP7.59□□□□□ -1.19
CHD6-202ENST00000373222 ADAMTS19Q8TE59 1207 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 ANP32BQ92688 251 aaKnown RBP7.59□□□□□ -1.19
CHD6-202ENST00000373222 DDX11Q96FC9 970 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 GPATCH3Q96I76 525 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 USP25Q9UHP3 1055 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 MED23Q9ULK4 1368 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 TK2O00142 265 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 AP5Z1O43299 807 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
CHD6-202ENST00000373222 CABP4P57796 275 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 NAALADL2Q58DX5 795 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 TNNI3KQ59H18 835 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 RUFY2Q8WXA3 655 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 TSPY26PQ9H489 355 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 TFIP11Q9UBB9 837 aaKnown RBP7.59□□□□□ -1.19
CHD6-202ENST00000373222 FPGT-TNNI3KV9GXZ4 949 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 KIF1AQ12756 1690 aa7.59□□□□□ -1.19
CHD6-202ENST00000373222 GNPATO15228 680 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 TAF5LO75529 589 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 CAMK4Q16566 473 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 LRRC24Q50LG9 513 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 ADGRD1Q6QNK2 874 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 MTMR14Q8NCE2 650 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 PUS3Q9BZE2 481 aaKnown RBP7.58□□□□□ -1.2
CHD6-202ENST00000373222 ZKSCAN1P17029 563 aaPredicted RBP7.58□□□□□ -1.2
CHD6-202ENST00000373222 MSNP26038 577 aaKnown RBP7.58□□□□□ -1.2
CHD6-202ENST00000373222 CASP7P55210 303 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 HSP90AB3PQ58FF7 597 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 Q6ZNB5 142 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 STOX1Q6ZVD7 989 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 CHST3Q7LGC8 479 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 TTC6Q86TZ1 520 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 SYNE4Q8N205 404 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 KCNB2Q92953 911 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.58□□□□□ -1.2
CHD6-202ENST00000373222 TJP1Q07157 1748 aa7.58□□□□□ -1.2
CHD6-202ENST00000373222 MYO5AQ9Y4I1 1855 aaKnown RBP7.58□□□□□ -1.2
CHD6-202ENST00000373222 PKD1L3Q7Z443 1732 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 CYP21A2P08686 494 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 FOXO4P98177 505 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 LARP1BQ659C4 914 aaKnown RBP7.57□□□□□ -1.2
CHD6-202ENST00000373222 DCAF5Q96JK2 942 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 FMNL2Q96PY5 1086 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 XIRP1Q702N8 1843 aaKnown RBP7.57□□□□□ -1.2
CHD6-202ENST00000373222 GOLIM4O00461 696 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 DPYSL4O14531 572 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 TPD52L2O43399 206 aaKnown RBP7.57□□□□□ -1.2
CHD6-202ENST00000373222 LIG1P18858 919 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 RPS6KB1P23443 525 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 ABL2P42684 1182 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 BLOC1S2Q6QNY1 142 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 ATG9AQ7Z3C6 839 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 FTOQ9C0B1 505 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■■■□□ 17.1
CHD6-202ENST00000373222 COPRSQ9NQ92 184 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
CHD6-202ENST00000373222 MRC1P22897 1456 aa7.57□□□□□ -1.2
CHD6-202ENST00000373222 EPB41L2O43491 1005 aaKnown RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 RABL6Q3YEC7 729 aaPredicted RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 PI16Q6UXB8 463 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 DPH6Q7L8W6 267 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 R3HCC1Q9Y3T6 440 aaKnown RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 TNS3Q68CZ2 1445 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 NUP188Q5SRE5 1749 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 A0A087WWV3 80 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 UBE2HP62256 183 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 CEBPZQ03701 1054 aaKnown RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 TOM1L2Q6ZVM7 507 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 BANK1Q8NDB2 785 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 TM6SF1Q9BZW5 370 aa7.56□□□□□ -1.2
CHD6-202ENST00000373222 TTC12Q9H892 705 aaPredicted RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
CHD6-202ENST00000373222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHD6-202ENST00000373222 SPATA31A3Q5VYP0 1347 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 LAMB4A4D0S4 1761 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 ATP5JP18859 108 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 RFC5P40937 340 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 CCDC183Q5T5S1 534 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 Q6ZUG5 572 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 CKAP2LQ8IYA6 745 aa7.55□□□□□ -1.2
CHD6-202ENST00000373222 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
CHD6-202ENST00000373222 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
CHD6-202ENST00000373222 PRDM11Q9NQV5 511 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms