RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 RESTQ13127 1097 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 NCAPHQ15003 741 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
SF3A3-201ENST00000373019 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
SF3A3-201ENST00000373019 HSD3B7Q9H2F3 369 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 CYP46A1Q9Y6A2 500 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 FBLN1P23142 703 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 USP8P40818 1118 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 DPCR1Q3MIW9 517 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 TTC19Q6DKK2 380 aaPredicted RBP11□□□□□ -0.65
SF3A3-201ENST00000373019 CCDC102AQ96A19 550 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 XAGE2Q96GT9 111 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 FAM107BQ9H098 131 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
SF3A3-201ENST00000373019 AOX1Q06278 1338 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 DCTN1Q14203 1278 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 ZKSCAN4Q969J2 545 aaPredicted RBP11□□□□□ -0.65
SF3A3-201ENST00000373019 NEXMIFQ5QGS0 1516 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 METP08581 1390 aa11□□□□□ -0.65
SF3A3-201ENST00000373019 CUTAO60888 179 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 SHOX2O60902 331 aaPredicted RBP10.99□□□□□ -0.65
SF3A3-201ENST00000373019 RNF40O75150 1001 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 FNTAP49354 379 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■□□□□ 11.3
SF3A3-201ENST00000373019 MYO5BQ9ULV0 1848 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 NRDCO43847 1150 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 VSNL1P62760 191 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
SF3A3-201ENST00000373019 SRGAP1Q7Z6B7 1085 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 FCHSD1Q86WN1 690 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 CD248Q9HCU0 757 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 CCT5P48643 541 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 NEDD9Q14511 834 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 GIMAP7Q8NHV1 300 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
SF3A3-201ENST00000373019 BPIFA3Q9BQP9 254 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 SLC24A3Q9HC58 644 aa10.99□□□□□ -0.65
SF3A3-201ENST00000373019 F6X3S4 739 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 ZSCAN12O43309 604 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 DHX8Q14562 1220 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 NEDD4P46934 1319 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 ANKRD33BA6NCL7 494 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 NEBLO76041 1014 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 ATP1A3P13637 1013 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 DPF2Q92785 391 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 CALR3Q96L12 384 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 IL1RAPL2Q9NP60 686 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 ADAMTS13Q76LX8 1427 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 MYO1FO00160 1098 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 HSP90B2PQ58FF3 399 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 AFAP1L1Q8TED9 768 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 N4BP2L2Q92802 583 aaPredicted RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 MYH15Q9Y2K3 1946 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
SF3A3-201ENST00000373019 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
SF3A3-201ENST00000373019 RTN2O75298 545 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 GNAI2P04899 355 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 CABS1Q96KC9 395 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 PUF60Q9UHX1 559 aaKnown RBP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 RCOR1Q9UKL0 485 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 GCFC2P16383 781 aaKnown RBP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 AARSP49588 968 aaKnown RBP eCLIP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 CDHR2Q9BYE9 1310 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 VEZTQ9HBM0 779 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 CPS1P31327 1500 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 ATP8B2P98198 1209 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 FANCCQ00597 558 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 FAM160A1Q05DH4 1040 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
SF3A3-201ENST00000373019 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 TEX11Q8IYF3 940 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 EHD4Q9H223 541 aa10.97□□□□□ -0.65
SF3A3-201ENST00000373019 A0A0G2JS52 829 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 ARHGAP6O43182 974 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 TFRCP02786 760 aaKnown RBP10.96□□□□□ -0.65
SF3A3-201ENST00000373019 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
SF3A3-201ENST00000373019 G2E3Q7L622 706 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 IGSF22Q8N9C0 903 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 TATDN2Q93075 761 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 DIP2AQ14689 1571 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 ERLIN1O75477 346 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 INPP5BP32019 993 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 WLSQ5T9L3 541 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 SLC4A10Q6U841 1118 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 TCEANC2Q96MN5 208 aa10.96□□□□□ -0.65
SF3A3-201ENST00000373019 FMNL2Q96PY5 1086 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms