RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TICAM2Q86XR7 235 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
PCIF1-201ENST00000372409 CACTINQ8WUQ7 758 aaKnown RBP19.53■□□□□ 0.72
PCIF1-201ENST00000372409 CHMP4CQ96CF2 233 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 ISCA1Q9BUE6 129 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 ZMYND15Q9H091 742 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 DCCP43146 1447 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 KCPQ6ZWJ8 1503 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 IFIT5Q13325 482 aaKnown RBP19.53■□□□□ 0.72
PCIF1-201ENST00000372409 RALYLQ86SE5 291 aaKnown RBP19.53■□□□□ 0.72
PCIF1-201ENST00000372409 C8orf76Q96K31 380 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 SDF4Q9BRK5 362 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 PUS7LQ9H0K6 701 aaKnown RBP19.53■□□□□ 0.72
PCIF1-201ENST00000372409 BCL2L12Q9HB09 334 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 PCDHA7Q9UN72 937 aa19.53■□□□□ 0.72
PCIF1-201ENST00000372409 A0A1B0GVL5 298 aa19.52■□□□□ 0.72
PCIF1-201ENST00000372409 ZFYP08048 801 aaPredicted RBP19.52■□□□□ 0.72
PCIF1-201ENST00000372409 CPLX1O14810 134 aa19.52■□□□□ 0.71
PCIF1-201ENST00000372409 FOXP2O15409 715 aa19.52■□□□□ 0.71
PCIF1-201ENST00000372409 STK38Q15208 465 aa19.52■□□□□ 0.71
PCIF1-201ENST00000372409 ENGASEQ8NFI3 743 aa19.52■□□□□ 0.71
PCIF1-201ENST00000372409 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 KIF6Q6ZMV9 814 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 MRPS27Q92552 414 aaKnown RBP19.51■□□□□ 0.71
PCIF1-201ENST00000372409 GJB4Q9NTQ9 266 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 ANO10Q9NW15 660 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
PCIF1-201ENST00000372409 HSPA2P54652 639 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 SYNE4Q8N205 404 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 APPBP2Q92624 585 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
PCIF1-201ENST00000372409 ZNF213O14771 459 aa19.5■□□□□ 0.71
PCIF1-201ENST00000372409 METTL24Q5JXM2 366 aa19.5■□□□□ 0.71
PCIF1-201ENST00000372409 NCOA7Q8NI08 942 aa19.5■□□□□ 0.71
PCIF1-201ENST00000372409 UBR2Q8IWV8 1755 aa19.5■□□□□ 0.71
PCIF1-201ENST00000372409 DHX16O60231 1041 aaKnown RBP19.5■□□□□ 0.71
PCIF1-201ENST00000372409 GPTP24298 496 aa19.5■□□□□ 0.71
PCIF1-201ENST00000372409 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
PCIF1-201ENST00000372409 GPAA1O43292 621 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 EVA1CP58658 441 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 ARID5BQ14865 1188 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 ZRSR1Q15695 479 aaKnown RBP19.49■□□□□ 0.71
PCIF1-201ENST00000372409 FILIP1Q7Z7B0 1213 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 CEP57L1Q8IYX8 460 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 AOPEPQ8N6M6 819 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 RTEL1Q9NZ71 1219 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 SPEF2Q9C093 1822 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 TNNT1P13805 278 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 CDC25BP30305 580 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 NKX1-1Q15270 411 aaPredicted RBP19.49■□□□□ 0.71
PCIF1-201ENST00000372409 ATP2B3Q16720 1220 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 DNAJC10Q8IXB1 793 aa19.49■□□□□ 0.71
PCIF1-201ENST00000372409 NDUFA8P51970 172 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 ADALQ6DHV7 355 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 SARM1Q6SZW1 724 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 DHX40Q8IX18 779 aaKnown RBP19.48■□□□□ 0.71
PCIF1-201ENST00000372409 MB21D2Q8IYB1 491 aaPredicted RBP19.48■□□□□ 0.71
PCIF1-201ENST00000372409 PCCAP05165 728 aaPredicted RBP19.48■□□□□ 0.71
PCIF1-201ENST00000372409 EVCP57679 992 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 LDHAL6AQ6ZMR3 332 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 FMR1NBQ8N0W7 255 aaPredicted RBP19.48■□□□□ 0.71
PCIF1-201ENST00000372409 LINC00301Q8NCQ3 95 aa19.48■□□□□ 0.71
PCIF1-201ENST00000372409 NWD2Q9ULI1 1742 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 APPP05067 770 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 ANTXR2P58335 489 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 MRFAP1L1Q96HT8 127 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
PCIF1-201ENST00000372409 ASAP1Q9ULH1 1129 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 HPS5Q9UPZ3 1129 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 LRRC8AQ8IWT6 810 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 ZBTB38Q8NAP3 1195 aaPredicted RBP19.47■□□□□ 0.71
PCIF1-201ENST00000372409 FBXO18Q8NFZ0 1043 aa19.47■□□□□ 0.71
PCIF1-201ENST00000372409 NAT10Q9H0A0 1025 aaKnown RBP19.47■□□□□ 0.71
PCIF1-201ENST00000372409 COL5A2P05997 1499 aaPredicted RBP19.47■□□□□ 0.71
PCIF1-201ENST00000372409 FBXL16Q8N461 479 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.46■□□□□ 0.71
PCIF1-201ENST00000372409 CNNM1Q9NRU3 951 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 FBXO3Q9UK99 471 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 MCAMP43121 646 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 TRDNQ13061 729 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 CARD10Q9BWT7 1032 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 DENND2AQ9ULE3 1009 aa19.46■□□□□ 0.71
PCIF1-201ENST00000372409 SPTLC2O15270 562 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 ITGA6P23229 1130 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 SLC9C2Q5TAH2 1124 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 KCNG4Q8TDN1 519 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 GREM2Q9H772 168 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 IDH1O75874 414 aaKnown RBP19.45■□□□□ 0.7
PCIF1-201ENST00000372409 MYSM1Q5VVJ2 828 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 BIN1O00499 593 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 RXRAP19793 462 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
PCIF1-201ENST00000372409 CSF1RP07333 972 aa19.44■□□□□ 0.7
PCIF1-201ENST00000372409 HLFQ16534 295 aa19.44■□□□□ 0.7
PCIF1-201ENST00000372409 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
PCIF1-201ENST00000372409 TNS2Q63HR2 1409 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms