RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 FAM98CQ17RN3 349 aaKnown RBP19.99■□□□□ 0.79
VEGFA-205ENST00000372067 APPBP2Q92624 585 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 KCNB2Q92953 911 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 SCAND2PQ9GZW5 306 aaPredicted RBP19.99■□□□□ 0.79
VEGFA-205ENST00000372067 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
VEGFA-205ENST00000372067 ZKSCAN5Q9Y2L8 839 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 PRC1O43663 620 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 CRKLP46109 303 aaKnown RBP19.99■□□□□ 0.79
VEGFA-205ENST00000372067 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 LRP2BPQ9P2M1 347 aa19.99■□□□□ 0.79
VEGFA-205ENST00000372067 IRX3P78415 501 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-205ENST00000372067 ZBTB9Q96C00 473 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 PDLIM2Q96JY6 352 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 COL15A1P39059 1388 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 LOC102724428A0A0B4J2F2 783 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 FGAP02671 866 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 RXRAP19793 462 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 SIK1P57059 783 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
VEGFA-205ENST00000372067 HS1BP3Q53T59 392 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 TAF3Q5VWG9 929 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-205ENST00000372067 OTUD7BQ6GQQ9 843 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 IL17RAQ96F46 866 aa19.98■□□□□ 0.79
VEGFA-205ENST00000372067 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
VEGFA-205ENST00000372067 SUSD4Q5VX71 490 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 MYRIPQ8NFW9 859 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 IL6STP40189 918 aaPredicted RBP19.97■□□□□ 0.79
VEGFA-205ENST00000372067 MCAMP43121 646 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 ME1P48163 572 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 CCDC24Q8N4L8 307 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
VEGFA-205ENST00000372067 CCDC102BQ68D86 513 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 NCOA7Q8NI08 942 aa19.97■□□□□ 0.79
VEGFA-205ENST00000372067 COL18A1P39060 1754 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 MCM5P33992 734 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 PDE8BO95263 885 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 KCNQ2O43526 872 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 TDO2P48775 406 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 HMGN5P82970 282 aaKnown RBP19.96■□□□□ 0.79
VEGFA-205ENST00000372067 TTF1Q15361 905 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-205ENST00000372067 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 MAGEB6Q8N7X4 407 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 SPC24Q8NBT2 197 aa19.96■□□□□ 0.79
VEGFA-205ENST00000372067 ZNF532Q9HCE3 1301 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 POLR3DP05423 398 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-205ENST00000372067 LIG1P18858 919 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 CCDC152Q4G0S7 254 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 NAPBQ9H115 298 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 MRC1P22897 1456 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 CCDC73Q6ZRK6 1079 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 CHMP4CQ96CF2 233 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 RAI14Q9P0K7 980 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 CCDC39Q9UFE4 941 aa19.95■□□□□ 0.78
VEGFA-205ENST00000372067 PUM3Q15397 648 aaKnown RBP19.94■□□□□ 0.78
VEGFA-205ENST00000372067 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 UQCRFS1P1P0C7P4 283 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
VEGFA-205ENST00000372067 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 MIGA1Q8NAN2 632 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 ORC3Q9UBD5 711 aaPredicted RBP19.94■□□□□ 0.78
VEGFA-205ENST00000372067 RIPOR2Q9Y4F9 1068 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 CSF1RP07333 972 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 CCDC82Q8N4S0 544 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 C8orf76Q96K31 380 aa19.94■□□□□ 0.78
VEGFA-205ENST00000372067 PIH1D3Q9NQM4 214 aaKnown RBP19.94■□□□□ 0.78
VEGFA-205ENST00000372067 KIAA2012Q0VF49 1180 aa19.93■□□□□ 0.78
VEGFA-205ENST00000372067 ZNF652Q9Y2D9 606 aa19.93■□□□□ 0.78
VEGFA-205ENST00000372067 DHX16O60231 1041 aaKnown RBP19.93■□□□□ 0.78
VEGFA-205ENST00000372067 TSGA10IPQ3SY00 556 aa19.93■□□□□ 0.78
VEGFA-205ENST00000372067 LEO1Q8WVC0 666 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-205ENST00000372067 ZNF396Q96N95 335 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-205ENST00000372067 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
VEGFA-205ENST00000372067 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
VEGFA-205ENST00000372067 SYNE3Q6ZMZ3 975 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 LPIN2Q92539 896 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.781e-19■□□□□ 9.7
VEGFA-205ENST00000372067 MINDY4BA8MYZ0 360 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 PFKFB2O60825 505 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 BCAMP50895 628 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 STK38Q15208 465 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-205ENST00000372067 B4E1Z4 1266 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 MBD4O95243 580 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 ADCY5O95622 1261 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 ARMT1Q9H993 441 aa19.92■□□□□ 0.78
VEGFA-205ENST00000372067 UBN2Q6ZU65 1347 aa19.91■□□□□ 0.78
VEGFA-205ENST00000372067 CAPN2P17655 700 aa19.91■□□□□ 0.78
VEGFA-205ENST00000372067 PDIA3P30101 505 aaKnown RBP19.91■□□□□ 0.78
VEGFA-205ENST00000372067 MARCH10Q8NA82 808 aaPredicted RBP19.91■□□□□ 0.78
VEGFA-205ENST00000372067 KCNG1Q9UIX4 513 aa19.91■□□□□ 0.78
VEGFA-205ENST00000372067 PDE6AP16499 860 aa19.91■□□□□ 0.78
VEGFA-205ENST00000372067 U2AF2P26368 475 aaKnown RBP eCLIP19.91■□□□□ 0.782e-48■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms