RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PAPPA2Q9BXP8 1791 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 BECN1Q14457 450 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 ANGEL2Q5VTE6 544 aaKnown RBP12.82□□□□□ -0.36
COL5A1-202ENST00000371820 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
COL5A1-202ENST00000371820 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
COL5A1-202ENST00000371820 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
COL5A1-202ENST00000371820 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-202ENST00000371820 SLC10A3P09131 477 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 SCARF1Q14162 830 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-202ENST00000371820 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 BICC1Q9H694 974 aaKnown RBP12.81□□□□□ -0.36
COL5A1-202ENST00000371820 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
COL5A1-202ENST00000371820 ZNF157P51786 506 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-202ENST00000371820 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-202ENST00000371820 NBR1Q14596 966 aa12.8□□□□□ -0.36
COL5A1-202ENST00000371820 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
COL5A1-202ENST00000371820 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-202ENST00000371820 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
COL5A1-202ENST00000371820 HDAC9Q9UKV0 1011 aa12.8□□□□□ -0.36
COL5A1-202ENST00000371820 MROH5Q6ZUA9 1318 aa12.8□□□□□ -0.36
COL5A1-202ENST00000371820 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
COL5A1-202ENST00000371820 TAF5LO75529 589 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-202ENST00000371820 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
COL5A1-202ENST00000371820 FKBP1BP68106 108 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-202ENST00000371820 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
COL5A1-202ENST00000371820 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
COL5A1-202ENST00000371820 TXNRD3Q86VQ6 643 aa12.78□□□□□ -0.36
COL5A1-202ENST00000371820 RASAL3Q86YV0 1011 aa12.78□□□□□ -0.36
COL5A1-202ENST00000371820 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
COL5A1-202ENST00000371820 IL1R1P14778 569 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 RGS19P49795 217 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
COL5A1-202ENST00000371820 GTF2IP78347 998 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 DGKZQ13574 1117 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 RNF186Q9NXI6 227 aa12.77□□□□□ -0.37
COL5A1-202ENST00000371820 BCAR3O75815 825 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 KLRK1P26718 216 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-202ENST00000371820 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
COL5A1-202ENST00000371820 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
COL5A1-202ENST00000371820 WNT10BO00744 389 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 TRPA1O75762 1119 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 GNAI3P08754 354 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
COL5A1-202ENST00000371820 MLLT1Q03111 559 aaPredicted RBP12.75□□□□□ -0.37
COL5A1-202ENST00000371820 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 CAVIN4Q5BKX8 364 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 VPS37DQ86XT2 251 aa12.75□□□□□ -0.37
COL5A1-202ENST00000371820 SNAP23O00161 211 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 SASH1O94885 1247 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 PDE8BO95263 885 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
COL5A1-202ENST00000371820 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 MOB2Q70IA6 237 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
COL5A1-202ENST00000371820 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
COL5A1-202ENST00000371820 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
COL5A1-202ENST00000371820 EYA2O00167 538 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 MYO1BO43795 1136 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 IFIT1P09914 478 aaKnown RBP12.73□□□□□ -0.37
COL5A1-202ENST00000371820 NF2P35240 595 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 LRRC24Q50LG9 513 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 TDRD7Q8NHU6 1098 aaKnown RBP12.73□□□□□ -0.37
COL5A1-202ENST00000371820 ZBED3Q96IU2 234 aaPredicted RBP12.73□□□□□ -0.37
COL5A1-202ENST00000371820 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
COL5A1-202ENST00000371820 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-202ENST00000371820 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
COL5A1-202ENST00000371820 UBE2Q2LH0YL09 131 aa12.72□□□□□ -0.37
COL5A1-202ENST00000371820 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-202ENST00000371820 CIAO1O76071 339 aa12.72□□□□□ -0.37
COL5A1-202ENST00000371820 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms