RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MX2P20592 715 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 DENND2CQ68D51 928 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
COL5A1-201ENST00000371817 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.34
COL5A1-201ENST00000371817 ANKRD20A3Q5VUR7 823 aa17.14■□□□□ 0.34
COL5A1-201ENST00000371817 ABTB1Q969K4 478 aaPredicted RBP17.14■□□□□ 0.34
COL5A1-201ENST00000371817 EIF2AQ9BY44 585 aaKnown RBP17.14■□□□□ 0.34
COL5A1-201ENST00000371817 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 RANBP6O60518 1105 aaKnown RBP17.14■□□□□ 0.33
COL5A1-201ENST00000371817 INPP1P49441 399 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 DNM1Q05193 864 aaKnown RBP17.14■□□□□ 0.33
COL5A1-201ENST00000371817 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 GAS8O95995 478 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 LIG3P49916 1009 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
COL5A1-201ENST00000371817 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
COL5A1-201ENST00000371817 CNGA1P29973 690 aa17.14■□□□□ 0.33
COL5A1-201ENST00000371817 RPSAP08865 295 aaKnown RBP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 MTMR3Q13615 1198 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 SESN3P58005 492 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 PPANQ9NQ55 473 aaKnown RBP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 CHMP2AO43633 222 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 PRPF31Q8WWY3 499 aaKnown RBP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL5A1-201ENST00000371817 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
COL5A1-201ENST00000371817 F13A1P00488 732 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 C20orf194Q5TEA3 1177 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-201ENST00000371817 MAK16Q9BXY0 300 aaKnown RBP17.12■□□□□ 0.33
COL5A1-201ENST00000371817 PAK2Q13177 524 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 CARD6Q9BX69 1037 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-201ENST00000371817 ATICP31939 592 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 RNF40O75150 1001 aa17.12■□□□□ 0.33
COL5A1-201ENST00000371817 TRIM14Q14142 442 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 USP6NLQ92738 828 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 ATP2A3Q93084 1043 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 KLHL14Q9P2G3 628 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
COL5A1-201ENST00000371817 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 BRD3Q15059 726 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 GON4LQ3T8J9 2241 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 GJC1P36383 396 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 ITIH3Q06033 890 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 HHATQ5VTY9 493 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 MED4Q9NPJ6 270 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
COL5A1-201ENST00000371817 RILPQ96NA2 401 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 SCINQ9Y6U3 715 aa17.11■□□□□ 0.33
COL5A1-201ENST00000371817 MRPL46Q9H2W6 279 aaKnown RBP17.1■□□□□ 0.33
COL5A1-201ENST00000371817 CCDC92Q53HC0 331 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-201ENST00000371817 RSPH3Q86UC2 560 aa17.1■□□□□ 0.33
COL5A1-201ENST00000371817 WIZO95785 1651 aa17.1■□□□□ 0.33
COL5A1-201ENST00000371817 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
COL5A1-201ENST00000371817 ERMNQ8TAM6 284 aa17.1■□□□□ 0.33
COL5A1-201ENST00000371817 CAPS2Q9BXY5 557 aa17.1■□□□□ 0.33
COL5A1-201ENST00000371817 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
COL5A1-201ENST00000371817 JRKLQ9Y4A0 524 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.09■□□□□ 0.33
COL5A1-201ENST00000371817 HAUS8Q9BT25 410 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 RRP15Q9Y3B9 282 aaKnown RBP17.09■□□□□ 0.33
COL5A1-201ENST00000371817 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 GIPC1O14908 333 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 BAG2O95816 211 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 NLRP6P59044 892 aa17.09■□□□□ 0.33
COL5A1-201ENST00000371817 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.33
COL5A1-201ENST00000371817 APOEP02649 317 aa17.08■□□□□ 0.33
COL5A1-201ENST00000371817 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.33
COL5A1-201ENST00000371817 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.33
COL5A1-201ENST00000371817 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.32
COL5A1-201ENST00000371817 SCOCQ9UIL1 159 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 ELP1O95163 1332 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 ESRRGP62508 458 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 SATB2Q9UPW6 733 aa17.08■□□□□ 0.32
COL5A1-201ENST00000371817 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 KIF21BO75037 1637 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 SPTLC2O15270 562 aa17.07■□□□□ 0.32
COL5A1-201ENST00000371817 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms