RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 PRELPP51888 382 aa21.48■■□□□ 1.03
VPS37B-202ENST00000371248 DNAJC2Q99543 621 aaKnown RBP21.48■■□□□ 1.03
VPS37B-202ENST00000371248 HMG20BQ9P0W2 317 aa21.48■■□□□ 1.03
VPS37B-202ENST00000371248 GRIN3BO60391 1043 aa21.47■■□□□ 1.03
VPS37B-202ENST00000371248 MAP4K4O95819 1239 aaPredicted RBP21.47■■□□□ 1.03
VPS37B-202ENST00000371248 TTC22Q5TAA0 569 aa21.47■■□□□ 1.03
VPS37B-202ENST00000371248 PODNQ7Z5L7 613 aa21.47■■□□□ 1.03
VPS37B-202ENST00000371248 SPATA5Q8NB90 893 aa21.47■■□□□ 1.03
VPS37B-202ENST00000371248 COL4A5P29400 1685 aa21.46■■□□□ 1.03
VPS37B-202ENST00000371248 SEMA3EO15041 775 aa21.46■■□□□ 1.03
VPS37B-202ENST00000371248 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
VPS37B-202ENST00000371248 HAUS7Q99871 368 aa21.46■■□□□ 1.03
VPS37B-202ENST00000371248 JAG2Q9Y219 1238 aa21.46■■□□□ 1.03
VPS37B-202ENST00000371248 DICER1Q9UPY3 1922 aaKnown RBP21.46■■□□□ 1.03
VPS37B-202ENST00000371248 SCN9AQ15858 1988 aa21.45■■□□□ 1.02
VPS37B-202ENST00000371248 ZAP70P43403 619 aa21.45■■□□□ 1.02
VPS37B-202ENST00000371248 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.02
VPS37B-202ENST00000371248 NIM1KQ8IY84 436 aa21.45■■□□□ 1.02
VPS37B-202ENST00000371248 JDP2Q8WYK2 163 aa21.45■■□□□ 1.02
VPS37B-202ENST00000371248 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.02
VPS37B-202ENST00000371248 GSPT1P15170 499 aaKnown RBP21.44■■□□□ 1.02
VPS37B-202ENST00000371248 LMNB1P20700 586 aa21.44■■□□□ 1.02
VPS37B-202ENST00000371248 KCNQ5Q9NR82 932 aa21.44■■□□□ 1.02
VPS37B-202ENST00000371248 AK9Q5TCS8 1911 aa21.44■■□□□ 1.02
VPS37B-202ENST00000371248 MYO5AQ9Y4I1 1855 aaKnown RBP21.44■■□□□ 1.02
VPS37B-202ENST00000371248 EDC3Q96F86 508 aaKnown RBP21.44■■□□□ 1.02
VPS37B-202ENST00000371248 TRIM6-TRIM34B2RNG4 842 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 ZBTB22O15209 634 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 GTF2IP78347 998 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 PAG1Q9NWQ8 432 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 YDJCA8MPS7 323 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 GOLIM4O00461 696 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 CYP2E1P05181 493 aaPredicted RBP21.43■■□□□ 1.02
VPS37B-202ENST00000371248 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 ANTXR1Q9H6X2 564 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 ZNRF3Q9ULT6 936 aa21.43■■□□□ 1.02
VPS37B-202ENST00000371248 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
VPS37B-202ENST00000371248 RILPL2Q969X0 211 aa21.42■■□□□ 1.02
VPS37B-202ENST00000371248 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
VPS37B-202ENST00000371248 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
VPS37B-202ENST00000371248 PSME4Q14997 1843 aa21.41■■□□□ 1.02
VPS37B-202ENST00000371248 WDR66Q8TBY9 1149 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 FAM205AQ6ZU69 1335 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 SDSP20132 328 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 BMP2KLQ5H9B9 411 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 RNF181Q9P0P0 153 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 ABCF2Q9UG63 623 aa21.4■■□□□ 1.02
VPS37B-202ENST00000371248 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 DCAF8L1A6NGE4 600 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 RAD17O75943 681 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 TTF1Q15361 905 aaPredicted RBP21.39■■□□□ 1.01
VPS37B-202ENST00000371248 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 EVI5LQ96CN4 794 aa21.39■■□□□ 1.01
VPS37B-202ENST00000371248 ZNF646O15015 1829 aaPredicted RBP21.39■■□□□ 1.01
VPS37B-202ENST00000371248 STRIP1Q5VSL9 837 aa21.38■■□□□ 1.01
VPS37B-202ENST00000371248 PIH1D3Q9NQM4 214 aaKnown RBP21.38■■□□□ 1.01
VPS37B-202ENST00000371248 MFSD14BQ5SR56 506 aa21.38■■□□□ 1.01
VPS37B-202ENST00000371248 C9orf131Q5VYM1 1079 aa21.38■■□□□ 1.01
VPS37B-202ENST00000371248 DOCK2Q92608 1830 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 FZD9O00144 591 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 TBC1D22AQ8WUA7 517 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 MXD3Q9BW11 206 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 MYH7P12883 1935 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 SALL1Q9NSC2 1324 aa21.37■■□□□ 1.01
VPS37B-202ENST00000371248 CXCL9Q07325 125 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 DACT2Q5SW24 774 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 LRP2BPQ9P2M1 347 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 TIAM2Q8IVF5 1701 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 PSMD14O00487 310 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 EIF6P56537 245 aaKnown RBP21.36■■□□□ 1.01
VPS37B-202ENST00000371248 ZGPATQ8N5A5 531 aaKnown RBP21.36■■□□□ 1.01
VPS37B-202ENST00000371248 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 FSD1Q9BTV5 496 aa21.36■■□□□ 1.01
VPS37B-202ENST00000371248 IDH1O75874 414 aaKnown RBP21.35■■□□□ 1.01
VPS37B-202ENST00000371248 CIAPIN1Q6FI81 312 aa21.35■■□□□ 1.01
VPS37B-202ENST00000371248 PRDX5P30044 214 aa21.35■■□□□ 1.01
VPS37B-202ENST00000371248 CERS5Q8N5B7 392 aa21.35■■□□□ 1.01
VPS37B-202ENST00000371248 GRIK5Q16478 980 aa21.34■■□□□ 1.01
VPS37B-202ENST00000371248 SPTY2D1Q68D10 685 aaPredicted RBP21.34■■□□□ 1.01
VPS37B-202ENST00000371248 RAI14Q9P0K7 980 aa21.34■■□□□ 1.01
VPS37B-202ENST00000371248 LDHBP07195 334 aaKnown RBP21.33■■□□□ 1.01
VPS37B-202ENST00000371248 VIL1P09327 827 aaKnown RBP21.33■■□□□ 1.01
VPS37B-202ENST00000371248 TNIP1Q15025 636 aa21.33■■□□□ 1.01
VPS37B-202ENST00000371248 FKBP1AP62942 108 aaKnown RBP21.33■■□□□ 1
VPS37B-202ENST00000371248 MAP3K12Q12852 859 aa21.33■■□□□ 1
VPS37B-202ENST00000371248 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
VPS37B-202ENST00000371248 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.32■■□□□ 1
VPS37B-202ENST00000371248 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
VPS37B-202ENST00000371248 SLC9C2Q5TAH2 1124 aa21.32■■□□□ 1
VPS37B-202ENST00000371248 ZBTB12Q9Y330 459 aaPredicted RBP21.32■■□□□ 1
VPS37B-202ENST00000371248 GJA3Q9Y6H8 435 aa21.32■■□□□ 1
VPS37B-202ENST00000371248 F8W031 263 aaPredicted RBP21.31■■□□□ 1
VPS37B-202ENST00000371248 CHGBP05060 677 aa21.31■■□□□ 1
VPS37B-202ENST00000371248 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
VPS37B-202ENST00000371248 MYO3BQ8WXR4 1341 aa21.3■■□□□ 1
VPS37B-202ENST00000371248 MYH2Q9UKX2 1941 aa21.3■■□□□ 1
VPS37B-202ENST00000371248 MECOMQ03112 1051 aa21.3■■□□□ 1
VPS37B-202ENST00000371248 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms