RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 BRAPQ7Z569 592 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 RIMBP2O15034 1052 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 GNPATO15228 680 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 VEZTQ9HBM0 779 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 TNNI3KQ59H18 835 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 DENND2AQ9ULE3 1009 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 FPGT-TNNI3KV9GXZ4 949 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 ITGA6P23229 1130 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 CYLC1P35663 651 aaPredicted RBP22.37■■□□□ 1.17
LMO4-202ENST00000370544 A0A1B0GUL7 405 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 SKILP12757 684 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 RXRAP19793 462 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 EYA3Q99504 573 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 JAG2Q9Y219 1238 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 USP37Q86T82 979 aa22.37■■□□□ 1.17
LMO4-202ENST00000370544 SPDYE3A6NKU9 549 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 CHL1O00533 1208 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 CCDC186Q7Z3E2 898 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 ZNF830Q96NB3 372 aaPredicted RBP22.36■■□□□ 1.17
LMO4-202ENST00000370544 KRT13P13646 458 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 CDCA7Q9BWT1 371 aaPredicted RBP22.36■■□□□ 1.17
LMO4-202ENST00000370544 RBM28Q9NW13 759 aaKnown RBP22.36■■□□□ 1.17
LMO4-202ENST00000370544 TNNI2P48788 182 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 TYRO3Q06418 890 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 RBM17Q96I25 401 aaKnown RBP22.36■■□□□ 1.17
LMO4-202ENST00000370544 KRT79Q5XKE5 535 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 ORAI2Q96SN7 254 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 SPECC1Q5M775 1068 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 TRAPPC3LQ5T215 181 aa22.36■■□□□ 1.17
LMO4-202ENST00000370544 SLC52A2Q9HAB3 445 aa22.35■■□□□ 1.17
LMO4-202ENST00000370544 MCM7P33993 719 aa22.35■■□□□ 1.17
LMO4-202ENST00000370544 LGR6Q9HBX8 967 aa22.35■■□□□ 1.17
LMO4-202ENST00000370544 POLR3GO15318 223 aaPredicted RBP22.35■■□□□ 1.17
LMO4-202ENST00000370544 SEC24BO95487 1268 aa22.35■■□□□ 1.17
LMO4-202ENST00000370544 DHX37Q8IY37 1157 aaKnown RBP22.35■■□□□ 1.17
LMO4-202ENST00000370544 USP19O94966 1318 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 GNA11P29992 359 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 TIMM10P62072 90 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 ZSWIM4Q9H7M6 989 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 LMTK3Q96Q04 1460 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 PUM3Q15397 648 aaKnown RBP22.34■■□□□ 1.17
LMO4-202ENST00000370544 OTUD7AQ8TE49 926 aaPredicted RBP22.34■■□□□ 1.17
LMO4-202ENST00000370544 PRIMPOLQ96LW4 560 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 ZKSCAN3Q9BRR0 538 aa22.34■■□□□ 1.17
LMO4-202ENST00000370544 RPS6KB1P23443 525 aa22.33■■□□□ 1.17
LMO4-202ENST00000370544 CCDC129Q6ZRS4 1044 aa22.33■■□□□ 1.17
LMO4-202ENST00000370544 AOX1Q06278 1338 aa22.33■■□□□ 1.16
LMO4-202ENST00000370544 SH3TC1Q8TE82 1336 aa22.33■■□□□ 1.16
LMO4-202ENST00000370544 SYT1P21579 422 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
LMO4-202ENST00000370544 CTR9Q6PD62 1173 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 CPA1P15085 419 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 CNBD1Q8NA66 436 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 DBNDD2Q9BQY9 259 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 PDE8AO60658 829 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 XRCC6P12956 609 aaKnown RBP eCLIP22.32■■□□□ 1.16
LMO4-202ENST00000370544 CKAP4Q07065 602 aaKnown RBP22.32■■□□□ 1.16
LMO4-202ENST00000370544 SMC1AQ14683 1233 aaKnown RBP22.32■■□□□ 1.16
LMO4-202ENST00000370544 LMOD1P29536 600 aaPredicted RBP22.32■■□□□ 1.16
LMO4-202ENST00000370544 KLHDC4Q8TBB5 520 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 XAGE2Q96GT9 111 aa22.32■■□□□ 1.16
LMO4-202ENST00000370544 SLC27A2O14975 620 aa22.31■■□□□ 1.16
LMO4-202ENST00000370544 PARP1P09874 1014 aaKnown RBP22.31■■□□□ 1.16
LMO4-202ENST00000370544 NOLC1Q14978 699 aaKnown RBP eCLIP22.31■■□□□ 1.16
LMO4-202ENST00000370544 TTC6Q86TZ1 520 aa22.31■■□□□ 1.16
LMO4-202ENST00000370544 MAATS1Q7Z4T9 603 aa22.3■■□□□ 1.16
LMO4-202ENST00000370544 BICDL2A1A5D9 508 aa22.3■■□□□ 1.16
LMO4-202ENST00000370544 DTHD1Q6ZMT9 781 aa22.3■■□□□ 1.16
LMO4-202ENST00000370544 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
LMO4-202ENST00000370544 CCNL1Q9UK58 526 aaPredicted RBP22.3■■□□□ 1.16
LMO4-202ENST00000370544 JDP2Q8WYK2 163 aa22.3■■□□□ 1.16
LMO4-202ENST00000370544 PHACTR2O75167 634 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 SUCLG2Q96I99 432 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 B4E1Z4 1266 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
LMO4-202ENST00000370544 ATL3Q6DD88 541 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 ZNF594Q96JF6 807 aaPredicted RBP22.29■■□□□ 1.16
LMO4-202ENST00000370544 DNAI1Q9UI46 699 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 FAM13AO94988 1023 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 GTPBP4Q9BZE4 634 aaKnown RBP22.29■■□□□ 1.16
LMO4-202ENST00000370544 ARMT1Q9H993 441 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 PTPRTO14522 1441 aa22.29■■□□□ 1.16
LMO4-202ENST00000370544 GOLGA6L10A0A0M3HER8 536 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
LMO4-202ENST00000370544 KIAA0753Q2KHM9 967 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 TEX11Q8IYF3 940 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 SAP30BPQ9UHR5 308 aaKnown RBP22.28■■□□□ 1.16
LMO4-202ENST00000370544 PLXNC1O60486 1568 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 UFL1O94874 794 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 PTGS1P23219 599 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 PLS1Q14651 629 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 TMEM87BQ96K49 555 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 PLVAPQ9BX97 442 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 SYNCQ9H7C4 482 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 POLD1P28340 1107 aa22.28■■□□□ 1.16
LMO4-202ENST00000370544 STX17P56962 302 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms