RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 CEP85Q6P2H3 762 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 IFI16Q16666 785 aaKnown RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 AOX1Q06278 1338 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 SSFA2P28290 1259 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 RAB3GAP1Q15042 981 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 MSANTD4Q8NCY6 345 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 SIK1P57059 783 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 HS2ST1Q7LGA3 356 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 ZNF496Q96IT1 587 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 APPBP2Q92624 585 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 IBTKQ9P2D0 1353 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-202ENST00000369367 GCKRQ14397 625 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 ATP7BP35670 1465 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 BACH1O14867 736 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 MCM4P33991 863 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 ARID3AQ99856 593 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 PTPRTO14522 1441 aa11.24□□□□□ -0.61
SCAF11-202ENST00000369367 KDM5AP29375 1690 aaKnown RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 KRT2P35908 639 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 CA8P35219 290 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 DHX32Q7L7V1 743 aaKnown RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 HOOK3Q86VS8 718 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 KIF1BO60333 1816 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 MBD4O95243 580 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 CTNNA2P26232 953 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 STX1AQ16623 288 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 PPP1R2P41236 205 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 NMIQ13287 307 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 TDRD12Q587J7 1177 aaKnown RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 TAOK3Q9H2K8 898 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 NEMFO60524 1076 aa11.23□□□□□ -0.61
SCAF11-202ENST00000369367 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-202ENST00000369367 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 CCDC112Q8NEF3 446 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 DDX17Q92841 729 aaKnown RBP11.22□□□□□ -0.61
SCAF11-202ENST00000369367 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 PSMA7O14818 248 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 MCM3P25205 808 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 LRSAM1Q6UWE0 723 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-202ENST00000369367 DDX12PQ92771 950 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 FAM13AO94988 1023 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 ACTN2P35609 894 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-202ENST00000369367 FILIP1Q7Z7B0 1213 aa11.22□□□□□ -0.61
SCAF11-202ENST00000369367 EIF4A1P60842 406 aaKnown RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 MYOM2P54296 1465 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 KIF5CO60282 957 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 SYKP43405 635 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 PPM1FP49593 454 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 NUP88Q99567 741 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 LGR6Q9HBX8 967 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 USP8P40818 1118 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 ATL3Q6DD88 541 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 Q6ZUG5 572 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 BRAPQ7Z569 592 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 ALS2CR12Q96Q35 445 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 PABPN1LA6NDY0 278 aaKnown RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 PAFAH1B1P43034 410 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 GSDMDP57764 484 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 TAF12Q16514 161 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 CCDC117Q8IWD4 279 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 CHURC1Q8WUH1 139 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-202ENST00000369367 SYNCQ9H7C4 482 aa11.21□□□□□ -0.61
SCAF11-202ENST00000369367 CTSWP56202 376 aa11.21□□□□□ -0.62
SCAF11-202ENST00000369367 TRIM47Q96LD4 638 aa11.21□□□□□ -0.62
SCAF11-202ENST00000369367 GCC2Q8IWJ2 1684 aa11.21□□□□□ -0.62
SCAF11-202ENST00000369367 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
SCAF11-202ENST00000369367 AXDND1Q5T1B0 1012 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-202ENST00000369367 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-202ENST00000369367 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms