RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CDCA7Q9BWT1 371 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 VRTNQ9H8Y1 702 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 KIAA1522Q9P206 1035 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 BCS1LQ9Y276 419 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 C10orf71Q711Q0 1435 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 UNC80Q8N2C7 3258 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 CACNA1GO43497 2377 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 ATP1A2P50993 1020 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 GRM1Q13255 1194 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 AAMPQ13685 434 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 SF3A1Q15459 793 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 TSGA10IPQ3SY00 556 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 SPTY2D1Q68D10 685 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 CYP2U1Q7Z449 544 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 COL23A1Q86Y22 540 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 NBPF15Q8N660 670 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 RNF181Q9P0P0 153 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 MKI67P46013 3256 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 CASP8AP2Q9UKL3 1982 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 ARHGEF10O15013 1369 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 SPTBN5Q9NRC6 3674 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 NAIPQ13075 1403 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 TIMP2P16035 220 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 GTF2IP78347 998 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 SUGT1Q9Y2Z0 365 aa4.66□□□□□ -1.66
ECHDC1-205ENST00000368295 LRRC37A3O60309 1634 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 LILRA1O75019 489 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 ADH1AP07327 375 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 CSB-PGBD3P0DP91 1061 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 WAPLQ7Z5K2 1190 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 GALNT6Q8NCL4 622 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 MICAL1Q8TDZ2 1067 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 ITPKCQ96DU7 683 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 PRDM6Q9NQX0 595 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 RRP7BPQ9NSQ0 103 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 DNAAF2Q9NVR5 837 aaKnown RBP4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 SBNO1A3KN83 1393 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 KIF15Q9NS87 1388 aa4.65□□□□□ -1.66
ECHDC1-205ENST00000368295 VIRMAQ69YN4 1812 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 HFM1A2PYH4 1435 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 FAM196BA6NMK8 535 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L15C9J2P7 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L10C9JJH3 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L13C9JLJ4 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L12C9JPN9 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L11C9JVI0 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L21D6R901 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L18D6R9N7 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L22D6RA61 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L17D6RBQ6 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L19D6RCP7 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L20D6RJB6 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 NEFMP07197 916 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 BMP1P13497 986 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 SCTRP47872 440 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 PSME1Q06323 249 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 USP17L24Q0WX57 530 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 DDB1Q16531 1140 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 KANK4Q5T7N3 995 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 NUTM2GQ5VZR2 741 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 KLF16Q9BXK1 252 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 UBA5Q9GZZ9 404 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 OSBPL3Q9H4L5 887 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 ZFAND3Q9H8U3 227 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 METTL14Q9HCE5 456 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 MAGEC2Q9UBF1 373 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 RBM19Q9Y4C8 960 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 CDC42BPGQ6DT37 1551 aa4.65□□□□□ -1.67
ECHDC1-205ENST00000368295 CAPN5O15484 640 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 ATG7O95352 703 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 RASA1P20936 1047 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 MAP2K1Q02750 393 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 PLA2G4EQ3MJ16 856 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 OGFOD1Q8N543 542 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 MORC4Q8TE76 937 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 LAS1LQ9Y4W2 734 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 BRCA2P51587 3418 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 WDR33Q9C0J8 1336 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 KANK1Q14678 1352 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 PARP4Q9UKK3 1724 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 A0A0G2JLW4 131 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 PLA2G5P39877 138 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 SRPK2P78362 688 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 CBLBQ13191 982 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 ELOAQ14241 798 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 CDCA8Q53HL2 280 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 ZNF385CQ66K41 422 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 Q6ZVU0 165 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 LARGE2Q8N3Y3 721 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 SVOPQ8N4V2 548 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 MEIOBQ8N635 442 aa4.64□□□□□ -1.67
ECHDC1-205ENST00000368295 PRR36Q9H6K5 1346 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 TNRC6CQ9HCJ0 1690 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 PLEKHG2Q9H7P9 1386 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 PLEKHH1Q9ULM0 1364 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 LTBP1Q14766 1721 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 UPP2O95045 317 aa4.63□□□□□ -1.67
ECHDC1-205ENST00000368295 GNRH1P01148 92 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms