RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 BECN1Q14457 450 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 RNF181Q9P0P0 153 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.51□□□□□ -0.09
USF1-203ENST00000368021 SOGA3Q5TF21 947 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 TMX4Q9H1E5 349 aaPredicted RBP14.5□□□□□ -0.09
USF1-203ENST00000368021 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 HELLSQ9NRZ9 838 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 MYH7P12883 1935 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 CHD4Q14839 1912 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 RNF113AO15541 343 aaKnown RBP14.5□□□□□ -0.09
USF1-203ENST00000368021 HSPA4P34932 840 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 KCNJ4P48050 445 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 BCAMP50895 628 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 RASGRF1Q13972 1273 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 RABEP1Q15276 862 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 MCMDC2Q4G0Z9 681 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 CAVIN4Q5BKX8 364 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 SPATA5Q8NB90 893 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 ZNF526Q8TF50 670 aaPredicted RBP14.5□□□□□ -0.09
USF1-203ENST00000368021 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
USF1-203ENST00000368021 GNL3LQ9NVN8 582 aaKnown RBP14.5□□□□□ -0.09
USF1-203ENST00000368021 HMG20BQ9P0W2 317 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 ATP6V0A2Q9Y487 856 aa14.5□□□□□ -0.09
USF1-203ENST00000368021 XDHP47989 1333 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 CCDC171Q6TFL3 1326 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
USF1-203ENST00000368021 LMNB1P20700 586 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 ZMYM1Q5SVZ6 1142 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 PI16Q6UXB8 463 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 RTKN2Q8IZC4 609 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 SNX21Q969T3 373 aa14.49□□□□□ -0.09
USF1-203ENST00000368021 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.49□□□□□ -0.094e-8■■■■■ 30.4
USF1-203ENST00000368021 RRP9O43818 475 aaKnown RBP14.48□□□□□ -0.09
USF1-203ENST00000368021 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 FBXO33Q7Z6M2 555 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
USF1-203ENST00000368021 LRRC37AA6NMS7 1700 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 SEMA3EO15041 775 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 SP8Q8IXZ3 490 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 ANKIB1Q9P2G1 1089 aa14.48□□□□□ -0.09
USF1-203ENST00000368021 NSFL1CQ9UNZ2 370 aaKnown RBP14.48□□□□□ -0.09
USF1-203ENST00000368021 PDS5AQ29RF7 1337 aaKnown RBP14.47□□□□□ -0.09
USF1-203ENST00000368021 IRS2Q9Y4H2 1338 aa14.47□□□□□ -0.09
USF1-203ENST00000368021 DOCK2Q92608 1830 aa14.47□□□□□ -0.09
USF1-203ENST00000368021 GYG1P46976 350 aa14.47□□□□□ -0.09
USF1-203ENST00000368021 PTH1RQ03431 593 aa14.47□□□□□ -0.09
USF1-203ENST00000368021 C15orf52Q6ZUT6 534 aaKnown RBP14.47□□□□□ -0.09
USF1-203ENST00000368021 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
USF1-203ENST00000368021 VPS37DQ86XT2 251 aa14.47□□□□□ -0.09
USF1-203ENST00000368021 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
USF1-203ENST00000368021 CC2D2BQ6DHV5 1058 aa14.46□□□□□ -0.09
USF1-203ENST00000368021 DPP8Q6V1X1 898 aaPredicted RBP14.46□□□□□ -0.09
USF1-203ENST00000368021 KCNB2Q92953 911 aa14.46□□□□□ -0.09
USF1-203ENST00000368021 TBC1D2Q9BYX2 928 aa14.46□□□□□ -0.09
USF1-203ENST00000368021 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.09
USF1-203ENST00000368021 UBE3CQ15386 1083 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 MPNDQ8N594 471 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 ZNF784Q8NCA9 323 aaPredicted RBP14.45□□□□□ -0.1
USF1-203ENST00000368021 APPBP2Q92624 585 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 PIH1D3Q9NQM4 214 aaKnown RBP14.45□□□□□ -0.1
USF1-203ENST00000368021 CHGBP05060 677 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 ATP2B4P23634 1241 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 HIBADHP31937 336 aaKnown RBP14.45□□□□□ -0.1
USF1-203ENST00000368021 ADD2P35612 726 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 NECTIN1Q15223 517 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 SEC62Q99442 399 aaKnown RBP14.45□□□□□ -0.1
USF1-203ENST00000368021 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
USF1-203ENST00000368021 LTBP1Q14766 1721 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 FER1L6Q2WGJ9 1857 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 MYO5AQ9Y4I1 1855 aaKnown RBP14.44□□□□□ -0.1
USF1-203ENST00000368021 GPSM2P81274 684 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 SLC9C2Q5TAH2 1124 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 DSCC1Q9BVC3 393 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
USF1-203ENST00000368021 MAST3O60307 1309 aa14.44□□□□□ -0.1
USF1-203ENST00000368021 C6orf229H3BNL8 230 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
USF1-203ENST00000368021 KLRK1P26718 216 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 OSBP2Q969R2 916 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 GPR101Q96P66 508 aaPredicted RBP14.43□□□□□ -0.1
USF1-203ENST00000368021 PSMD1Q99460 953 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 GGA1Q9UJY5 639 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 LTBP3Q9NS15 1303 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 SBF1O95248 1867 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 MYH13Q9UKX3 1938 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 CCDC88AQ3V6T2 1871 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 COL1A1P02452 1464 aaPredicted RBP14.43□□□□□ -0.1
USF1-203ENST00000368021 SNED1Q8TER0 1413 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 ST18O60284 1047 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 IGSF3O75054 1194 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 PDE6AP16499 860 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
USF1-203ENST00000368021 GSE1Q14687 1217 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 AOC3Q16853 763 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms