RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RNF34Q969K3 372 aa17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 CCT6BQ92526 530 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 FNBP1Q96RU3 617 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 CFAP157Q5JU67 520 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 JAKMIP2Q96AA8 810 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 TBC1D2Q9BYX2 928 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 FRMD4BQ9Y2L6 1034 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.431e-12■■■□□ 17
NUCKS1-201ENST00000367142 KRT86O43790 486 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 ATP2C2O75185 946 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 GMNNO75496 209 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.433e-14■■■■□ 23.9
NUCKS1-201ENST00000367142 KIF5AQ12840 1032 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 PTGS1P23219 599 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
NUCKS1-201ENST00000367142 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 MCM7P33993 719 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 KIFAP3Q92845 792 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 HAUS7Q99871 368 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 CRCPO75575 148 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 CCDC42Q96M95 316 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 PPP1R7Q15435 360 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 STX10O60499 249 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 TERF1P54274 439 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 ANKS4BQ8N8V4 417 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 SELENOSQ9BQE4 189 aa17.71■□□□□ 0.43
NUCKS1-201ENST00000367142 SMTNP53814 917 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 BIRC3Q13489 604 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 SEL1L2Q5TEA6 688 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 CCDC65Q8IXS2 484 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 MTRF1LQ9UGC7 380 aaKnown RBP17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 UBXN1Q04323 297 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 CTAGE9A4FU28 777 aa17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
NUCKS1-201ENST00000367142 KRT5P13647 590 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 BIRC2Q13490 618 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 MAST3O60307 1309 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 SPTLC2O15270 562 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 DKC1O60832 514 aaKnown RBP eCLIP17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 ATP8B2P98198 1209 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 HSP90AA4PQ58FG1 418 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 GNPATO15228 680 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 EPB41P11171 864 aaKnown RBP17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 RASA3Q14644 834 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 GIMAP6Q6P9H5 292 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
NUCKS1-201ENST00000367142 IFT74Q96LB3 600 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 NOL3O60936 208 aaKnown RBP17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 FANCAO15360 1455 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 HARSP12081 509 aaKnown RBP17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 STRN3Q13033 797 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 AOPEPQ8N6M6 819 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 PLCH2O75038 1416 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 INF2Q27J81 1249 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 GABPB2Q8TAK5 448 aaPredicted RBP17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 EXOC7Q9UPT5 735 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 DCAF17Q5H9S7 520 aaPredicted RBP17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
NUCKS1-201ENST00000367142 SV2BQ7L1I2 683 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 TRIM7Q9C029 511 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 FAM204AQ9H8W3 233 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 CDAN1Q8IWY9 1227 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms