RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
CNIH4-202ENST00000366857 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 NEDD4P46934 1319 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 ZNF772Q68DY9 489 aaPredicted RBP11.23□□□□□ -0.61
CNIH4-202ENST00000366857 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 RTFDC1Q9BY42 306 aaPredicted RBP11.23□□□□□ -0.61
CNIH4-202ENST00000366857 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 LCTP09848 1927 aa11.23□□□□□ -0.61
CNIH4-202ENST00000366857 TXNRD1Q16881 649 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
CNIH4-202ENST00000366857 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
CNIH4-202ENST00000366857 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
CNIH4-202ENST00000366857 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
CNIH4-202ENST00000366857 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 CHMP5Q9NZZ3 219 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 DENND2AQ9ULE3 1009 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 APPBP2Q92624 585 aa11.22□□□□□ -0.61
CNIH4-202ENST00000366857 LRRC37A2A6NM11 1700 aa11.21□□□□□ -0.61
CNIH4-202ENST00000366857 CPA1P15085 419 aa11.21□□□□□ -0.61
CNIH4-202ENST00000366857 KCNA3P22001 575 aa11.21□□□□□ -0.61
CNIH4-202ENST00000366857 TDRD7Q8NHU6 1098 aaKnown RBP11.21□□□□□ -0.61
CNIH4-202ENST00000366857 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
CNIH4-202ENST00000366857 SEMA3EO15041 775 aa11.21□□□□□ -0.62
CNIH4-202ENST00000366857 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.62
CNIH4-202ENST00000366857 LDHAL6AQ6ZMR3 332 aa11.21□□□□□ -0.62
CNIH4-202ENST00000366857 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.62
CNIH4-202ENST00000366857 PTPRFP10586 1907 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 MCM4P33991 863 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 GNPATO15228 680 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 SLC5A1P13866 664 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
CNIH4-202ENST00000366857 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
CNIH4-202ENST00000366857 E7EWF7 191 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 GRAPQ13588 217 aa11.2□□□□□ -0.62
CNIH4-202ENST00000366857 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
CNIH4-202ENST00000366857 GOLIM4O00461 696 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 PDE6AP16499 860 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 NTRK3Q16288 839 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 TBC1D10CQ8IV04 446 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 NSUN4Q96CB9 384 aaKnown RBP11.19□□□□□ -0.62
CNIH4-202ENST00000366857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
CNIH4-202ENST00000366857 FGAP02671 866 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
CNIH4-202ENST00000366857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
CNIH4-202ENST00000366857 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 BCAMP50895 628 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 GRIK5Q16478 980 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
CNIH4-202ENST00000366857 GAKO14976 1311 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
CNIH4-202ENST00000366857 IFIT1P09914 478 aaKnown RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 BECN1Q14457 450 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 PRPF40BQ6NWY9 871 aaKnown RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 WDR81Q562E7 1941 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 PFKFB2O60825 505 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 SRGNP10124 158 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 CDC5LQ99459 802 aaKnown RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
CNIH4-202ENST00000366857 PLIN4Q96Q06 1357 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 FUT2Q10981 343 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 ANO2Q9NQ90 1003 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 SMIM22K7EJ46 135 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 UQCRFS1P1P0C7P4 283 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 SEC23AQ15436 765 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 CASC1Q6TDU7 716 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 GPT2Q8TD30 523 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 RUFY2Q8WXA3 655 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 LIMCH1Q9UPQ0 1083 aa11.18□□□□□ -0.62
CNIH4-202ENST00000366857 TRIM37O94972 964 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 EVX2Q03828 476 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 CYB5R4Q7L1T6 521 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 MORC2Q9Y6X9 1032 aaPredicted RBP11.17□□□□□ -0.62
CNIH4-202ENST00000366857 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 BAG4O95429 457 aaKnown RBP11.17□□□□□ -0.62
CNIH4-202ENST00000366857 SCRN1Q12765 414 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 POLLQ9UGP5 575 aa11.17□□□□□ -0.62
CNIH4-202ENST00000366857 DOCK1Q14185 1865 aa11.16□□□□□ -0.62
CNIH4-202ENST00000366857 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms