RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 PGAP2Q9UHJ9 254 aa8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
RNU1-55P-201ENST00000365510 MROH5Q6ZUA9 1318 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 TRPA1O75762 1119 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 BBOX1O75936 387 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 RGS19P49795 217 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 HUNKP57058 714 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 KIAA2012Q0VF49 1180 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 GRAPQ13588 217 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 GRAPLQ8TC17 118 aaPredicted RBP8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 RTFDC1Q9BY42 306 aaPredicted RBP8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 BCL11AQ9H165 835 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 SEC31BQ9NQW1 1179 aa8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
RNU1-55P-201ENST00000365510 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 SMARCA5O60264 1052 aaPredicted RBP8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 MAP2K2P36507 400 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 RGS3P49796 1198 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 LRRC24Q50LG9 513 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 TMC4Q7Z404 712 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 AACSQ86V21 672 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 GPATCH3Q96I76 525 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 PUS3Q9BZE2 481 aaKnown RBP8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 IL1RAPL2Q9NP60 686 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
RNU1-55P-201ENST00000365510 ZNF609O15014 1411 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 H7C1D1 291 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 SASH1O94885 1247 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 RPS8P62241 208 aaKnown RBP8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 TFCP2Q12800 502 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 MKRN3Q13064 507 aaKnown RBP8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 TNIP1Q15025 636 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 PUM3Q15397 648 aaKnown RBP8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 KRT26Q7Z3Y9 468 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 CSRNP1Q96S65 589 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 TMX4Q9H1E5 349 aaPredicted RBP8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 GPR108Q9NPR9 543 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 RNF186Q9NXI6 227 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 RIPOR2Q9Y4F9 1068 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
RNU1-55P-201ENST00000365510 SPEF2Q9C093 1822 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 ECE2O60344 883 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 MX1P20591 662 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 PDE4AP27815 886 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 KCNJ4P48050 445 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 ZNF157P51786 506 aaPredicted RBP8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 CHRNDQ07001 517 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 RGMBQ6NW40 437 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 SUPT20HQ8NEM7 779 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 R3HDMLQ9H3Y0 253 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 AOX1Q06278 1338 aa8.29□□□□□ -1.08
RNU1-55P-201ENST00000365510 A0A1B0GUL7 405 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 UBE2Q2LH0YL09 131 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 ERC2O15083 957 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 PDE8BO95263 885 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 TBC1D8O95759 1140 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 SLC5A1P13866 664 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 SCARF1Q14162 830 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 SKAP1Q86WV1 359 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 LPIN2Q92539 896 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 ANKRD2Q9GZV1 360 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 GBA2Q9HCG7 927 aaPredicted RBP8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 MINPP1Q9UNW1 487 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 SCN9AQ15858 1988 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 XDHP47989 1333 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 TTC41PQ6P2S7 1318 aa8.28□□□□□ -1.08
RNU1-55P-201ENST00000365510 DUOX1Q9NRD9 1551 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 LRRC37AA6NMS7 1700 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 IFIT1P09914 478 aaKnown RBP8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 PDE1AP54750 535 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 PRKG1Q13976 671 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 EAF2Q96CJ1 260 aaPredicted RBP8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 CDCA5Q96FF9 252 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 ANKIB1Q9P2G1 1089 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 SALL3Q9BXA9 1300 aa8.27□□□□□ -1.09
RNU1-55P-201ENST00000365510 TNRC18O15417 2968 aaPredicted RBP8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 TAF5LO75529 589 aa8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 GLRX3O76003 335 aaKnown RBP8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 UBE4AQ14139 1066 aa8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 KIF4BQ2VIQ3 1234 aa8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
RNU1-55P-201ENST00000365510 CCDC158Q5M9N0 1113 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms