RNA–Protein interactions for RNA: ENST00000363299.1

RNU5D-1-201, Transcript of RNA, U5D small nuclear 1, humanhuman

BASIC

Gene RNU5D-1, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5D-1-201ENST00000363299 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
RNU5D-1-201ENST00000363299 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
RNU5D-1-201ENST00000363299 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
RNU5D-1-201ENST00000363299 H3BRJ5 948 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 RLBP1P12271 317 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 PCDH1Q08174 1060 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 C20orf204Q6ZNR8 217 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 C1orf229Q6ZS94 237 aaPredicted RBP6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 CCSER2Q9H7U1 834 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 GGT7Q9UJ14 662 aa6.75□□□□□ -1.33
RNU5D-1-201ENST00000363299 SHISA8B8ZZ34 492 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 B3GALT4O96024 378 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 EPHA1P21709 976 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 ZC3H6P61129 1189 aaKnown RBP6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 PPP2R3AQ06190 1150 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 PWP1Q13610 501 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 ERMP1Q7Z2K6 904 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 VN1R5Q7Z5H4 357 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 USP48Q86UV5 1035 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 TGIF2Q9GZN2 237 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 PRDM6Q9NQX0 595 aa6.74□□□□□ -1.33
RNU5D-1-201ENST00000363299 CELA3AP09093 270 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 IKBKEQ14164 716 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 GRIK5Q16478 980 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 FAM117BQ6P1L5 589 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 IL22RA1Q8N6P7 574 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 ZNF775Q96BV0 537 aaPredicted RBP6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 BTBD6Q96KE9 485 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 C8orf37Q96NL8 207 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 SEC31BQ9NQW1 1179 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 SH2B1Q9NRF2 756 aaPredicted RBP6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 TMEM39AQ9NV64 488 aa6.73□□□□□ -1.33
RNU5D-1-201ENST00000363299 ENC1O14682 589 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 SAMM50Q9Y512 469 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 PPME1Q9Y570 386 aa6.72□□□□□ -1.33
RNU5D-1-201ENST00000363299 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 DGKGP49619 791 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 WNT8BQ93098 351 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 PCDHGB7Q9Y5F8 929 aa6.71□□□□□ -1.34
RNU5D-1-201ENST00000363299 BAG6P46379 1132 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 LIG3P49916 1009 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 PCNX4Q63HM2 1172 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 ZNF385CQ66K41 422 aaPredicted RBP6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 C8orf86Q6ZUL3 223 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 NEDD1Q8NHV4 660 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 WHAMMQ8TF30 809 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 RSRP1Q9BUV0 290 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 RRAGCQ9HB90 399 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 KBTBD4Q9NVX7 518 aa6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.7□□□□□ -1.34
RNU5D-1-201ENST00000363299 NID1P14543 1247 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 LMNB1P20700 586 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 CDC25BP30305 580 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 ARL4DP49703 201 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 RPS26P62854 115 aaKnown RBP6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 TTBK2Q6IQ55 1244 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 TXNDC11Q6PKC3 985 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 RELL1Q8IUW5 271 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 DCAF11Q8TEB1 546 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 SLC7A3Q8WY07 619 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 TMEM74Q96NL1 305 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
RNU5D-1-201ENST00000363299 LINC01387J3KSC0 135 aa6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 PIK3R2O00459 728 aa6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 PAGE1O75459 146 aa6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 NME2P22392 152 aa6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 GBP2P32456 591 aaPredicted RBP6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 GNL2Q13823 731 aaKnown RBP6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 PHC3Q8NDX5 983 aa6.68□□□□□ -1.34
RNU5D-1-201ENST00000363299 RHOVQ96L33 236 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms