RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 OAS2P29728 719 aaKnown RBP20.35■□□□□ 0.85
SMG5-201ENST00000361813 ATP2B3Q16720 1220 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 CCDC96Q2M329 555 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 ATP10AO60312 1499 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 UTP14CQ5TAP6 766 aaKnown RBP20.35■□□□□ 0.85
SMG5-201ENST00000361813 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 SUCLG2Q96I99 432 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 TRIM75PA6NK02 468 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 MYO1BO43795 1136 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 SLC5A1P13866 664 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 HOXC9P31274 260 aa20.35■□□□□ 0.85
SMG5-201ENST00000361813 CYLC1P35663 651 aaPredicted RBP20.35■□□□□ 0.85
SMG5-201ENST00000361813 NAA16Q6N069 864 aaPredicted RBP20.35■□□□□ 0.85
SMG5-201ENST00000361813 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
SMG5-201ENST00000361813 CHMP4BP1P59074 171 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 KRI1Q8N9T8 703 aaKnown RBP20.34■□□□□ 0.85
SMG5-201ENST00000361813 A0A087WWV3 80 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 TNNI3KQ59H18 835 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 FPGT-TNNI3KV9GXZ4 949 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 TTC31Q49AM3 519 aaPredicted RBP20.34■□□□□ 0.85
SMG5-201ENST00000361813 NFATC2IPQ8NCF5 419 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 MRFAP1L1Q96HT8 127 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMG5-201ENST00000361813 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 KCNH3Q9ULD8 1083 aa20.34■□□□□ 0.85
SMG5-201ENST00000361813 EBAG9O00559 213 aa20.33■□□□□ 0.85
SMG5-201ENST00000361813 ARHGAP6O43182 974 aa20.33■□□□□ 0.85
SMG5-201ENST00000361813 NLRP12P59046 1061 aa20.33■□□□□ 0.85
SMG5-201ENST00000361813 HSF2BPO75031 334 aa20.33■□□□□ 0.85
SMG5-201ENST00000361813 NAA15Q9BXJ9 866 aaKnown RBP20.33■□□□□ 0.85
SMG5-201ENST00000361813 MKNK2Q9HBH9 465 aa20.33■□□□□ 0.85
SMG5-201ENST00000361813 CFAP65Q6ZU64 1925 aaKnown RBP20.33■□□□□ 0.85
SMG5-201ENST00000361813 IGSF22Q8N9C0 903 aa20.33■□□□□ 0.84
SMG5-201ENST00000361813 EAF2Q96CJ1 260 aaPredicted RBP20.33■□□□□ 0.84
SMG5-201ENST00000361813 MTX1Q13505 466 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 KIAA1468Q9P260 1216 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 ASXL2Q76L83 1435 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 CCT6AP40227 531 aaKnown RBP20.32■□□□□ 0.84
SMG5-201ENST00000361813 TCP11L1Q9NUJ3 509 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 NFE2L3Q9Y4A8 694 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 ATP2C2O75185 946 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 ETF1P62495 437 aaKnown RBP20.32■□□□□ 0.84
SMG5-201ENST00000361813 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 LARGE1O95461 756 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 NEFHP12036 1026 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 CLEC17AQ6ZS10 378 aa20.32■□□□□ 0.84
SMG5-201ENST00000361813 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
SMG5-201ENST00000361813 NEK11Q8NG66 645 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 ATRIPQ8WXE1 791 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
SMG5-201ENST00000361813 DYDC1Q8WWB3 177 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 TMCO5BA8MYB1 307 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 TSG101Q99816 390 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 HELLSQ9NRZ9 838 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 KRT86O43790 486 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 GOPCQ9HD26 462 aa20.31■□□□□ 0.84
SMG5-201ENST00000361813 UBXN1Q04323 297 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 CNGA4Q8IV77 575 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 RMND1Q9NWS8 449 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 KRT23Q9C075 422 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 STAT6P42226 847 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 NOP2P46087 812 aaKnown RBP20.3■□□□□ 0.84
SMG5-201ENST00000361813 TUBB4BP68371 445 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
SMG5-201ENST00000361813 ARHGEF5Q12774 1597 aa20.3■□□□□ 0.84
SMG5-201ENST00000361813 ZEB2O60315 1214 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 FGFR1OPO95684 399 aaKnown RBP20.29■□□□□ 0.84
SMG5-201ENST00000361813 KIF5AQ12840 1032 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 KBTBD3Q8NAB2 608 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 PYM1Q9BRP8 204 aaKnown RBP20.29■□□□□ 0.84
SMG5-201ENST00000361813 POLR2DO15514 142 aaKnown RBP20.29■□□□□ 0.84
SMG5-201ENST00000361813 ZSCAN26Q16670 478 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 IQSEC3Q9UPP2 1182 aaPredicted RBP20.29■□□□□ 0.84
SMG5-201ENST00000361813 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 SLC4A8Q2Y0W8 1093 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
SMG5-201ENST00000361813 RNMTO43148 476 aaKnown RBP20.28■□□□□ 0.84
SMG5-201ENST00000361813 BMP15O95972 392 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 ADKP55263 362 aaKnown RBP20.28■□□□□ 0.84
SMG5-201ENST00000361813 ADALQ6DHV7 355 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 TRMT44Q8IYL2 757 aaKnown RBP20.28■□□□□ 0.84
SMG5-201ENST00000361813 VPS16Q9H269 839 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 LUC7L2Q9Y383 392 aaKnown RBP20.28■□□□□ 0.84
SMG5-201ENST00000361813 TUBBP07437 444 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 CCDC40Q4G0X9 1142 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 SLC4A4Q9Y6R1 1079 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 PSMA7O14818 248 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 KRT83P78385 493 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 FAM114A1Q8IWE2 563 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
SMG5-201ENST00000361813 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
SMG5-201ENST00000361813 CCDC122Q5T0U0 273 aa20.27■□□□□ 0.84
SMG5-201ENST00000361813 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.84
SMG5-201ENST00000361813 CABP5Q9NP86 173 aa20.27■□□□□ 0.84
SMG5-201ENST00000361813 TACC1O75410 805 aa20.27■□□□□ 0.84
SMG5-201ENST00000361813 MAP2K1Q02750 393 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms