RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 NKX1-1Q15270 411 aaPredicted RBP18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 PUS7LQ9H0K6 701 aaKnown RBP18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 PCDHA7Q9UN72 937 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 UBR2Q8IWV8 1755 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 CTAGE5O15320 804 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 ZAP70P43403 619 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 STX1AQ16623 288 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 GJB4Q9NTQ9 266 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 KINO60870 393 aaKnown RBP18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 FBXL16Q8N461 479 aa18.18■□□□□ 0.5
CNKSR1-201ENST00000361530 ARID5BQ14865 1188 aa18.17■□□□□ 0.5
CNKSR1-201ENST00000361530 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
CNKSR1-201ENST00000361530 DHX40Q8IX18 779 aaKnown RBP18.17■□□□□ 0.5
CNKSR1-201ENST00000361530 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
CNKSR1-201ENST00000361530 PRC1O43663 620 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 ANTXR2P58335 489 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 SARM1Q6SZW1 724 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 C16orf45Q96MC5 204 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 KLF18A0A0U1RQI7 1052 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 A0A1B0GVL5 298 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 AKAP2Q9Y2D5 859 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 CLIC4Q9Y696 253 aa18.16■□□□□ 0.5
CNKSR1-201ENST00000361530 IL2RBP14784 551 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 CDC25BP30305 580 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 SPEF2Q9C093 1822 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 NKX2-3Q8TAU0 364 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 DENND2AQ9ULE3 1009 aa18.15■□□□□ 0.5
CNKSR1-201ENST00000361530 TNS2Q63HR2 1409 aa18.14■□□□□ 0.5
CNKSR1-201ENST00000361530 ZFYP08048 801 aaPredicted RBP18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 NDUFA8P51970 172 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 LINC00301Q8NCQ3 95 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 APPBP2Q92624 585 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 GOLGA8BA8MQT2 603 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 BECN2A8MW95 431 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 CSF1RP07333 972 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 ADALQ6DHV7 355 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 MRPS27Q92552 414 aaKnown RBP18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 MRFAP1L1Q96HT8 127 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 C8orf76Q96K31 380 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 ANO10Q9NW15 660 aa18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 ORC3Q9UBD5 711 aaPredicted RBP18.14■□□□□ 0.49
CNKSR1-201ENST00000361530 GPAA1O43292 621 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 PCCAP05165 728 aaPredicted RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 LRRC8AQ8IWT6 810 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 DNAJC10Q8IXB1 793 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 ZSCAN20P17040 1043 aaPredicted RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 LRRFIP1Q32MZ4 808 aaKnown RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 PAXIP1Q6ZW49 1069 aaPredicted RBP18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
CNKSR1-201ENST00000361530 DMTNQ08495 405 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 PDCL2Q8N4E4 241 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 AOPEPQ8N6M6 819 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 CTIFO43310 598 aaKnown RBP18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 MCAMP43121 646 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 STK38Q15208 465 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 CARD10Q9BWT7 1032 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
CNKSR1-201ENST00000361530 ZNF213O14771 459 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 TNNT1P13805 278 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 A0A1W2PQ27 194 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 A0A1W2PQ64 194 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 A0A1W2PQD8 194 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 GPTP24298 496 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 HLFQ16534 295 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 PLA2G12BQ9BX93 195 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 NEDD4P46934 1319 aa18.11■□□□□ 0.49
CNKSR1-201ENST00000361530 USP27XA6NNY8 438 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms