RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RTL9Q8NET4 1388 aa16■□□□□ 0.15
CTR9-201ENST00000361367 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
CTR9-201ENST00000361367 NF2P35240 595 aa16■□□□□ 0.15
CTR9-201ENST00000361367 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
CTR9-201ENST00000361367 PRM3Q9NNZ6 103 aa16■□□□□ 0.15
CTR9-201ENST00000361367 CFAP100Q494V2 611 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 RBM27Q9P2N5 1060 aaKnown RBP15.99■□□□□ 0.15
CTR9-201ENST00000361367 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 DEF6Q9H4E7 631 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
CTR9-201ENST00000361367 MAST3O60307 1309 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTR9-201ENST00000361367 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 CPA1P15085 419 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 TNNI2P48788 182 aa15.99■□□□□ 0.15
CTR9-201ENST00000361367 NAPAP54920 295 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 ZKSCAN3Q9BRR0 538 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
CTR9-201ENST00000361367 UBA5Q9GZZ9 404 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 AATFQ9NY61 560 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTR9-201ENST00000361367 B4E1Z4 1266 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 RXRAP19793 462 aa15.98■□□□□ 0.15
CTR9-201ENST00000361367 TRMT1LQ7Z2T5 733 aaKnown RBP15.98■□□□□ 0.15
CTR9-201ENST00000361367 CCP110O43303 1012 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 IDEP14735 1019 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 EIF5P55010 431 aaKnown RBP15.97■□□□□ 0.15
CTR9-201ENST00000361367 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
CTR9-201ENST00000361367 LUC7LQ9NQ29 371 aaKnown RBP15.97■□□□□ 0.15
CTR9-201ENST00000361367 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
CTR9-201ENST00000361367 LRRC24Q50LG9 513 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 GREM2Q9H772 168 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 UBE2HP62256 183 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 COPRSQ9NQ92 184 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 ZNF532Q9HCE3 1301 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 BMP15O95972 392 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 TBC1D22AQ8WUA7 517 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
CTR9-201ENST00000361367 SLC27A2O14975 620 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 SCLT1Q96NL6 688 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 USP31Q70CQ4 1352 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 PTCH1Q13635 1447 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
CTR9-201ENST00000361367 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 PTPDC1A2A3K4 754 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 PRDM1O75626 825 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 PPP4R3AQ6IN85 833 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 CERS3Q8IU89 383 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 SAMM50Q9Y512 469 aa15.96■□□□□ 0.15
CTR9-201ENST00000361367 ARHGEF40Q8TER5 1519 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
CTR9-201ENST00000361367 CALML3P27482 149 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 BIN1O00499 593 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 GYG1P46976 350 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 AMPD3Q01432 767 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 GPS2Q13227 327 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 RRP36Q96EU6 259 aaKnown RBP15.95■□□□□ 0.14
CTR9-201ENST00000361367 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 PYM1Q9BRP8 204 aaKnown RBP15.95■□□□□ 0.14
CTR9-201ENST00000361367 C6orf50Q9HD87 102 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 DIP2BQ9P265 1576 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 AFF2P51816 1311 aa15.95■□□□□ 0.14
CTR9-201ENST00000361367 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 KIF20AO95235 890 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
CTR9-201ENST00000361367 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 TSG101Q99816 390 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 F13A1P00488 732 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 GTF2IP78347 998 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 C2CD5Q86YS7 1000 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
CTR9-201ENST00000361367 CHRNDQ07001 517 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 MFSD14BQ5SR56 506 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 SMARCC2Q8TAQ2 1214 aa15.94■□□□□ 0.14
CTR9-201ENST00000361367 INTS4Q96HW7 963 aaKnown RBP15.94■□□□□ 0.14
CTR9-201ENST00000361367 NIM1KQ8IY84 436 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 PDE8BO95263 885 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 RAB3GAP1Q15042 981 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 SNX14Q9Y5W7 946 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 TRIM75PA6NK02 468 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
CTR9-201ENST00000361367 BCAMP50895 628 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 PUS3Q9BZE2 481 aaKnown RBP15.93■□□□□ 0.14
CTR9-201ENST00000361367 ADAMTS13Q76LX8 1427 aa15.93■□□□□ 0.14
CTR9-201ENST00000361367 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
CTR9-201ENST00000361367 SYKP43405 635 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
CTR9-201ENST00000361367 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
CTR9-201ENST00000361367 ANGEL1Q9UNK9 670 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms