RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ADD2P35612 726 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 HAND2P61296 217 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 C8orf37Q96NL8 207 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 MPHOSPH8Q99549 860 aa26.69■■□□□ 1.86
LDB1-201ENST00000361198 PIH1D3Q9NQM4 214 aaKnown RBP26.69■■□□□ 1.86
LDB1-201ENST00000361198 PFKFB2O60825 505 aa26.68■■□□□ 1.86
LDB1-201ENST00000361198 TTF1Q15361 905 aaPredicted RBP26.68■■□□□ 1.86
LDB1-201ENST00000361198 SLC9C2Q5TAH2 1124 aa26.68■■□□□ 1.86
LDB1-201ENST00000361198 FAM173BQ6P4H8 233 aa26.68■■□□□ 1.86
LDB1-201ENST00000361198 COL5A3P25940 1745 aaPredicted RBP26.67■■□□□ 1.86
LDB1-201ENST00000361198 IMMTQ16891 758 aaKnown RBP26.67■■□□□ 1.86
LDB1-201ENST00000361198 NGLY1Q96IV0 654 aa26.67■■□□□ 1.86
LDB1-201ENST00000361198 IDH1O75874 414 aaKnown RBP26.67■■□□□ 1.86
LDB1-201ENST00000361198 CCDC152Q4G0S7 254 aa26.67■■□□□ 1.86
LDB1-201ENST00000361198 ZSCAN25Q6NSZ9 544 aa26.67■■□□□ 1.86
LDB1-201ENST00000361198 BCL9LQ86UU0 1499 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 UQCRFS1P1P0C7P4 283 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 KCNQ4P56696 695 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 CSPP1Q1MSJ5 1256 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 LINC00116Q8NCU8 138 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 DDX11Q96FC9 970 aa26.66■■□□□ 1.86
LDB1-201ENST00000361198 VPS72Q15906 364 aa26.65■■□□□ 1.86
LDB1-201ENST00000361198 SMARCC2Q8TAQ2 1214 aa26.65■■□□□ 1.86
LDB1-201ENST00000361198 ARAP2Q8WZ64 1704 aa26.64■■□□□ 1.86
LDB1-201ENST00000361198 SLC5A1P13866 664 aa26.64■■□□□ 1.86
LDB1-201ENST00000361198 KRT85P78386 507 aa26.64■■□□□ 1.85
LDB1-201ENST00000361198 LLPHQ9BRT6 129 aaKnown RBP26.64■■□□□ 1.85
LDB1-201ENST00000361198 ZNF652Q9Y2D9 606 aa26.64■■□□□ 1.85
LDB1-201ENST00000361198 CTDNEP1O95476 244 aa26.63■■□□□ 1.85
LDB1-201ENST00000361198 CCT2P78371 535 aaKnown RBP26.63■■□□□ 1.85
LDB1-201ENST00000361198 UBE3CQ15386 1083 aa26.63■■□□□ 1.85
LDB1-201ENST00000361198 NSUN7Q8NE18 718 aaKnown RBP26.63■■□□□ 1.85
LDB1-201ENST00000361198 UBAP1LF5GYI3 381 aa26.63■■□□□ 1.85
LDB1-201ENST00000361198 PTF1AQ7RTS3 328 aa26.63■■□□□ 1.85
LDB1-201ENST00000361198 WWC3Q9ULE0 1092 aa26.63■■□□□ 1.85
LDB1-201ENST00000361198 ZNF532Q9HCE3 1301 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 ATRNO75882 1429 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 RRP9O43818 475 aaKnown RBP26.62■■□□□ 1.85
LDB1-201ENST00000361198 IGHMBP2P38935 993 aaKnown RBP26.62■■□□□ 1.85
LDB1-201ENST00000361198 TTC6Q86TZ1 520 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 RTL9Q8NET4 1388 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 PDE6AP16499 860 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 PDIA3P30101 505 aaKnown RBP26.62■■□□□ 1.85
LDB1-201ENST00000361198 RASGRF1Q13972 1273 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 CLEC4GQ6UXB4 293 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 FBXL16Q8N461 479 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 SPATA5Q8NB90 893 aa26.62■■□□□ 1.85
LDB1-201ENST00000361198 BCORQ6W2J9 1755 aa26.61■■□□□ 1.85
LDB1-201ENST00000361198 LAMB2P55268 1798 aa26.61■■□□□ 1.85
LDB1-201ENST00000361198 ZNF213O14771 459 aa26.61■■□□□ 1.85
LDB1-201ENST00000361198 ZNF274Q96GC6 653 aaPredicted RBP26.61■■□□□ 1.85
LDB1-201ENST00000361198 NCOA5Q9HCD5 579 aaKnown RBP26.61■■□□□ 1.85
LDB1-201ENST00000361198 GPHNQ9NQX3 736 aaPredicted RBP26.61■■□□□ 1.85
LDB1-201ENST00000361198 NAP1L2Q9ULW6 460 aaPredicted RBP26.61■■□□□ 1.85
LDB1-201ENST00000361198 TCRBV5S4A2TA0A5A2 114 aa26.6■■□□□ 1.85
LDB1-201ENST00000361198 ZNF831Q5JPB2 1677 aa26.59■■□□□ 1.85
LDB1-201ENST00000361198 MB21D2Q8IYB1 491 aaPredicted RBP26.59■■□□□ 1.85
LDB1-201ENST00000361198 PTPDC1A2A3K4 754 aa26.59■■□□□ 1.85
LDB1-201ENST00000361198 SMIM5Q71RC9 77 aa26.59■■□□□ 1.85
LDB1-201ENST00000361198 FUCA2Q9BTY2 467 aa26.59■■□□□ 1.85
LDB1-201ENST00000361198 H3BQV1 296 aa26.58■■□□□ 1.85
LDB1-201ENST00000361198 COL4A1P02462 1669 aa26.58■■□□□ 1.85
LDB1-201ENST00000361198 EVCP57679 992 aa26.58■■□□□ 1.85
LDB1-201ENST00000361198 IFFO2Q5TF58 517 aa26.58■■□□□ 1.85
LDB1-201ENST00000361198 TFIP11Q9UBB9 837 aaKnown RBP26.58■■□□□ 1.85
LDB1-201ENST00000361198 ELP1O95163 1332 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 PRC1O43663 620 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 BCAMP50895 628 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 CHRNDQ07001 517 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 ERFEQ4G0M1 354 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 NCOA7Q8NI08 942 aa26.58■■□□□ 1.84
LDB1-201ENST00000361198 RESTQ13127 1097 aa26.57■■□□□ 1.84
LDB1-201ENST00000361198 NBPF3Q9H094 633 aa26.57■■□□□ 1.84
LDB1-201ENST00000361198 SALL1Q9NSC2 1324 aa26.57■■□□□ 1.84
LDB1-201ENST00000361198 ANTXR2P58335 489 aa26.56■■□□□ 1.84
LDB1-201ENST00000361198 HMGN5P82970 282 aaKnown RBP26.56■■□□□ 1.84
LDB1-201ENST00000361198 FNBP4Q8N3X1 1017 aaPredicted RBP26.56■■□□□ 1.84
LDB1-201ENST00000361198 PPFIA3O75145 1194 aa26.56■■□□□ 1.84
LDB1-201ENST00000361198 APPP05067 770 aa26.56■■□□□ 1.84
LDB1-201ENST00000361198 HSP90AA2PQ14568 343 aaPredicted RBP26.56■■□□□ 1.84
LDB1-201ENST00000361198 C3orf67Q6ZVT6 689 aa26.56■■□□□ 1.84
LDB1-201ENST00000361198 SCAND2PQ9GZW5 306 aaPredicted RBP26.56■■□□□ 1.84
LDB1-201ENST00000361198 RALYLQ86SE5 291 aaKnown RBP26.55■■□□□ 1.84
LDB1-201ENST00000361198 CNTNAP4Q9C0A0 1308 aa26.55■■□□□ 1.84
LDB1-201ENST00000361198 MAGEB6Q8N7X4 407 aa26.55■■□□□ 1.84
LDB1-201ENST00000361198 AIDAQ96BJ3 306 aa26.55■■□□□ 1.84
LDB1-201ENST00000361198 STRBPQ96SI9 672 aaKnown RBP26.55■■□□□ 1.84
LDB1-201ENST00000361198 DENND2AQ9ULE3 1009 aa26.55■■□□□ 1.84
LDB1-201ENST00000361198 DOCK2Q92608 1830 aa26.54■■□□□ 1.84
LDB1-201ENST00000361198 BICDL1Q6ZP65 573 aa26.54■■□□□ 1.84
LDB1-201ENST00000361198 CDC5LQ99459 802 aaKnown RBP26.54■■□□□ 1.84
LDB1-201ENST00000361198 PTMAP06454 111 aaKnown RBP26.54■■□□□ 1.84
LDB1-201ENST00000361198 MAP3K12Q12852 859 aa26.54■■□□□ 1.84
LDB1-201ENST00000361198 UBE2Q2Q8WVN8 375 aa26.54■■□□□ 1.84
LDB1-201ENST00000361198 SPATA32Q96LK8 384 aa26.54■■□□□ 1.84
LDB1-201ENST00000361198 FOSBP53539 338 aa26.53■■□□□ 1.84
LDB1-201ENST00000361198 TBC1D10CQ8IV04 446 aa26.53■■□□□ 1.84
LDB1-201ENST00000361198 ZSCAN16Q9H4T2 348 aaPredicted RBP26.53■■□□□ 1.84
LDB1-201ENST00000361198 USP25Q9UHP3 1055 aa26.53■■□□□ 1.84
LDB1-201ENST00000361198 LEO1Q8WVC0 666 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms