RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
HLA-DRB1-201ENST00000360004 GPRC5DQ9NZD1 345 aa23.54■■□□□ 1.36
HLA-DRB1-201ENST00000360004 CNOT7Q9UIV1 285 aaKnown RBP23.54■■□□□ 1.36
HLA-DRB1-201ENST00000360004 IFIT2P09913 472 aaKnown RBP23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 PHKA1P46020 1223 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 SCNN1DP51172 638 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 OGFOD1Q8N543 542 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 DPF2Q92785 391 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 MXD3Q9BW11 206 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 CCDC8Q9H0W5 538 aaPredicted RBP23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 CLEC11AQ9Y240 323 aa23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.53■■□□□ 1.36
HLA-DRB1-201ENST00000360004 EPS15P42566 896 aa23.52■■□□□ 1.36
HLA-DRB1-201ENST00000360004 TAF1DQ9H5J8 278 aaPredicted RBP23.52■■□□□ 1.36
HLA-DRB1-201ENST00000360004 DCTPP1Q9H773 170 aa23.52■■□□□ 1.36
HLA-DRB1-201ENST00000360004 HDAC9Q9UKV0 1011 aa23.52■■□□□ 1.36
HLA-DRB1-201ENST00000360004 DENND2AQ9ULE3 1009 aa23.52■■□□□ 1.36
HLA-DRB1-201ENST00000360004 SCN9AQ15858 1988 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 SEMA3EO15041 775 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 USP17L8P0C7I0 530 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 MFSD14BQ5SR56 506 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 PNMA8AQ86V59 439 aaPredicted RBP23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 KIAA0825Q8IV33 1275 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 TBC1D22AQ8WUA7 517 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 DBNDD2Q9BQY9 259 aa23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 ADARB2Q9NS39 739 aaKnown RBP23.51■■□□□ 1.35
HLA-DRB1-201ENST00000360004 F8W031 263 aaPredicted RBP23.5■■□□□ 1.35
HLA-DRB1-201ENST00000360004 UQCRFS1P1P0C7P4 283 aa23.5■■□□□ 1.35
HLA-DRB1-201ENST00000360004 RBM26Q5T8P6 1007 aaKnown RBP23.5■■□□□ 1.35
HLA-DRB1-201ENST00000360004 EAF2Q96CJ1 260 aaPredicted RBP23.5■■□□□ 1.35
HLA-DRB1-201ENST00000360004 FAM205AQ6ZU69 1335 aa23.5■■□□□ 1.35
HLA-DRB1-201ENST00000360004 POTECB2RU33 542 aa23.49■■□□□ 1.35
HLA-DRB1-201ENST00000360004 KIF3CO14782 793 aa23.49■■□□□ 1.35
HLA-DRB1-201ENST00000360004 HDAC1Q13547 482 aaPredicted RBP23.49■■□□□ 1.35
HLA-DRB1-201ENST00000360004 WDR66Q8TBY9 1149 aa23.49■■□□□ 1.35
HLA-DRB1-201ENST00000360004 ARAP2Q8WZ64 1704 aa23.49■■□□□ 1.35
HLA-DRB1-201ENST00000360004 SCN4AP35499 1836 aa23.48■■□□□ 1.35
HLA-DRB1-201ENST00000360004 FKBP1AP62942 108 aaKnown RBP23.48■■□□□ 1.35
HLA-DRB1-201ENST00000360004 GCC1Q96CN9 775 aa23.48■■□□□ 1.35
HLA-DRB1-201ENST00000360004 SMARCA5O60264 1052 aaPredicted RBP23.47■■□□□ 1.35
HLA-DRB1-201ENST00000360004 TBC1D10BQ4KMP7 808 aaPredicted RBP23.47■■□□□ 1.35
HLA-DRB1-201ENST00000360004 USP50Q70EL3 339 aaPredicted RBP23.47■■□□□ 1.35
HLA-DRB1-201ENST00000360004 TLR7Q9NYK1 1049 aaKnown RBP23.47■■□□□ 1.35
HLA-DRB1-201ENST00000360004 DBNLQ9UJU6 430 aaKnown RBP23.47■■□□□ 1.35
HLA-DRB1-201ENST00000360004 SHTN1A0MZ66 631 aa23.46■■□□□ 1.35
HLA-DRB1-201ENST00000360004 RASGRF1Q13972 1273 aa23.46■■□□□ 1.35
HLA-DRB1-201ENST00000360004 PSME4Q14997 1843 aa23.46■■□□□ 1.35
HLA-DRB1-201ENST00000360004 TOMM70O94826 608 aa23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 RBM5P52756 815 aaKnown RBP eCLIP23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SAMD7Q7Z3H4 446 aa23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 CERS5Q8N5B7 392 aa23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 GMLQ99445 158 aa23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 TTF2Q9UNY4 1162 aaKnown RBP23.45■■□□□ 1.34
HLA-DRB1-201ENST00000360004 ARID4AP29374 1257 aaPredicted RBP23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 MMP14P50281 582 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 ANKRD45Q5TZF3 282 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 LDHDQ86WU2 507 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SPATA5Q8NB90 893 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 MYOZ2Q9NPC6 264 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 ABCF2Q9UG63 623 aa23.44■■□□□ 1.34
HLA-DRB1-201ENST00000360004 MAST3O60307 1309 aa23.43■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SMC1BQ8NDV3 1235 aa23.43■■□□□ 1.34
HLA-DRB1-201ENST00000360004 MYH13Q9UKX3 1938 aa23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 LDHBP07195 334 aaKnown RBP23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 ZNF280AP59817 542 aaPredicted RBP23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SPTY2D1Q68D10 685 aaPredicted RBP23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 RBM46Q8TBY0 533 aaKnown RBP23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 TRPM4Q8TD43 1214 aa23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SNRKQ9NRH2 765 aa23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
HLA-DRB1-201ENST00000360004 DLGAP5Q15398 846 aa23.41■■□□□ 1.34
HLA-DRB1-201ENST00000360004 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
HLA-DRB1-201ENST00000360004 CHADLQ6NUI6 762 aa23.41■■□□□ 1.34
HLA-DRB1-201ENST00000360004 SUGT1Q9Y2Z0 365 aa23.41■■□□□ 1.34
HLA-DRB1-201ENST00000360004 PDS5AQ29RF7 1337 aaKnown RBP23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 POTEIP0CG38 1075 aa23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 POTEJP0CG39 1038 aa23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 MCAMP43121 646 aa23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 DZIP1Q86YF9 867 aaKnown RBP23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 COL1A1P02452 1464 aaPredicted RBP23.4■■□□□ 1.34
HLA-DRB1-201ENST00000360004 IGHDP01880 384 aa23.39■■□□□ 1.33
HLA-DRB1-201ENST00000360004 PI16Q6UXB8 463 aa23.39■■□□□ 1.33
HLA-DRB1-201ENST00000360004 ERICH6Q7L0X2 663 aa23.39■■□□□ 1.33
HLA-DRB1-201ENST00000360004 ZNF512BQ96KM6 892 aaPredicted RBP23.39■■□□□ 1.33
HLA-DRB1-201ENST00000360004 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.33
HLA-DRB1-201ENST00000360004 SALL1Q9NSC2 1324 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 MYO1BO43795 1136 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 SCARF1Q14162 830 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 CFAP100Q494V2 611 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 TEKT1Q969V4 418 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 DCPSQ96C86 337 aaKnown RBP23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 RAI14Q9P0K7 980 aa23.38■■□□□ 1.33
HLA-DRB1-201ENST00000360004 EGFRP00533 1210 aa23.37■■□□□ 1.33
HLA-DRB1-201ENST00000360004 MAP1SQ66K74 1059 aaPredicted RBP23.37■■□□□ 1.33
HLA-DRB1-201ENST00000360004 DNAJC2Q99543 621 aaKnown RBP23.37■■□□□ 1.33
HLA-DRB1-201ENST00000360004 ZBTB22O15209 634 aa23.36■■□□□ 1.33
HLA-DRB1-201ENST00000360004 PRDX5P30044 214 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms