RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 LRRC27Q9C0I9 530 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 FANCCQ00597 558 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 SPECC1LQ69YQ0 1117 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 IMPACTQ9P2X3 320 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 AKR1B15C9JRZ8 316 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 LUC7L2Q9Y383 392 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 SBNO2Q9Y2G9 1366 aa17.74■□□□□ 0.43
TRAPPC11-202ENST00000357207 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 NCKAP5LQ9HCH0 1330 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 CYP7A1P22680 504 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 ANO1Q5XXA6 986 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 BABAM1Q9NWV8 329 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 MICALL1Q8N3F8 863 aa17.73■□□□□ 0.43
TRAPPC11-202ENST00000357207 CETN1Q12798 172 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 MMRN2Q9H8L6 949 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 NCOA5Q9HCD5 579 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 PALD1Q9ULE6 856 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 LDHCP07864 332 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 RXRAP19793 462 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 CAPZA3Q96KX2 299 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 ANKIB1Q9P2G1 1089 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 ASIC1P78348 528 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 UBXN1Q04323 297 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 IQUBQ8NA54 791 aa17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-202ENST00000357207 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 CTNNBL1Q8WYA6 563 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 RASSF4Q9H2L5 321 aa17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-202ENST00000357207 MACROD2A1Z1Q3 448 aa17.71■□□□□ 0.42
TRAPPC11-202ENST00000357207 HOXB7P09629 217 aa17.71■□□□□ 0.42
TRAPPC11-202ENST00000357207 UHRF1BP1LA0JNW5 1464 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 ATP2C2O75185 946 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 GNAQP50148 359 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 TIMM10P62072 90 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 TICAM2Q86XR7 235 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 DBNDD2Q9BQY9 259 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 KCNH3Q9ULD8 1083 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 USP19O94966 1318 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 ARHGAP6O43182 974 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZNF202O95125 648 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 CD2BP2O95400 341 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 BAG3O95817 575 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 KIAA0753Q2KHM9 967 aa17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-202ENST00000357207 JAK2O60674 1132 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 ME3Q16798 604 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 IGSF22Q8N9C0 903 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 CALML3P27482 149 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 VAV2P52735 878 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 RILPL1Q5EBL4 403 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 OTUD6BQ8N6M0 293 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 IQSEC3Q9UPP2 1182 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 SELENOOQ9BVL4 669 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
TRAPPC11-202ENST00000357207 TNIP1Q15025 636 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 TTC31Q49AM3 519 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 CCDC122Q5T0U0 273 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 ARFGAP2Q8N6H7 521 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 KLHDC4Q8TBB5 520 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 TNRQ92752 1358 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 LRMPQ12912 555 aa17.68■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZPR1O75312 459 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 HOXC9P31274 260 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 TUBB2AQ13885 445 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 TUBB2BQ9BVA1 445 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 ZEB2O60315 1214 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 CALM1P0DP23 149 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 CALM2P0DP24 149 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 CALM3P0DP25 149 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 KRT2P35908 639 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 NLRP12P59046 1061 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 SLF2Q8IX21 1173 aa17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 IBTKQ9P2D0 1353 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 NUTM2BA6NNL0 878 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 NUTM2EB1AL46 878 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-202ENST00000357207 GNAT2P19087 354 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms