RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LMBRD1Q9NUN5 540 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 SPEF2Q9C093 1822 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 FIBPO43427 364 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 TRPC5Q9UL62 973 aaPredicted RBP20.95■□□□□ 0.94
NPAS3-202ENST00000356141 PRKAB2O43741 272 aa20.94■□□□□ 0.94
NPAS3-202ENST00000356141 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
NPAS3-202ENST00000356141 ARMT1Q9H993 441 aa20.94■□□□□ 0.94
NPAS3-202ENST00000356141 MYO5AQ9Y4I1 1855 aaKnown RBP20.94■□□□□ 0.94
NPAS3-202ENST00000356141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
NPAS3-202ENST00000356141 SMIM22K7EJ46 135 aa20.94■□□□□ 0.94
NPAS3-202ENST00000356141 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
NPAS3-202ENST00000356141 STX6O43752 255 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 VPS37DQ86XT2 251 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 GPT2Q8TD30 523 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 MROH5Q6ZUA9 1318 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 MYH3P11055 1940 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 PDE6AP16499 860 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 RXRAP19793 462 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 FBXO41Q8TF61 875 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
NPAS3-202ENST00000356141 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 CHAF1AQ13111 956 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-202ENST00000356141 KCNB2Q92953 911 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 INTS4Q96HW7 963 aaKnown RBP20.92■□□□□ 0.94
NPAS3-202ENST00000356141 LRP2BPQ9P2M1 347 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-202ENST00000356141 FGFR2P21802 821 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 TRAPPC3LQ5T215 181 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 APPBP2Q92624 585 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 TM6SF1Q9BZW5 370 aa20.92■□□□□ 0.94
NPAS3-202ENST00000356141 BTAF1O14981 1849 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 GOLGA6L3A6NEY3 463 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 CDC37L1Q7L3B6 337 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 TOMM22Q9NS69 142 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 MBD4O95243 580 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 ADD2P35612 726 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 LARP1BQ659C4 914 aaKnown RBP20.91■□□□□ 0.94
NPAS3-202ENST00000356141 AIDAQ96BJ3 306 aa20.91■□□□□ 0.94
NPAS3-202ENST00000356141 EPB41L2O43491 1005 aaKnown RBP20.9■□□□□ 0.94
NPAS3-202ENST00000356141 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
NPAS3-202ENST00000356141 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
NPAS3-202ENST00000356141 CDC5LQ99459 802 aaKnown RBP20.9■□□□□ 0.94
NPAS3-202ENST00000356141 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.9■□□□□ 0.94
NPAS3-202ENST00000356141 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
NPAS3-202ENST00000356141 MINPP1Q9UNW1 487 aa20.9■□□□□ 0.94
NPAS3-202ENST00000356141 CHMP4CQ96CF2 233 aa20.9■□□□□ 0.94
NPAS3-202ENST00000356141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.89■□□□□ 0.94
NPAS3-202ENST00000356141 DNM1Q05193 864 aaKnown RBP20.89■□□□□ 0.94
NPAS3-202ENST00000356141 CTDSPL2Q05D32 466 aa20.89■□□□□ 0.94
NPAS3-202ENST00000356141 RRP12Q5JTH9 1297 aaKnown RBP20.89■□□□□ 0.94
NPAS3-202ENST00000356141 TXNRD3Q86VQ6 643 aa20.89■□□□□ 0.94
NPAS3-202ENST00000356141 IL17RAQ96F46 866 aa20.89■□□□□ 0.94
NPAS3-202ENST00000356141 RAI14Q9P0K7 980 aa20.89■□□□□ 0.94
NPAS3-202ENST00000356141 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
NPAS3-202ENST00000356141 NFIXQ14938 502 aa20.89■□□□□ 0.93
NPAS3-202ENST00000356141 CEBPZQ03701 1054 aaKnown RBP20.88■□□□□ 0.93
NPAS3-202ENST00000356141 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
NPAS3-202ENST00000356141 USP48Q86UV5 1035 aa20.88■□□□□ 0.93
NPAS3-202ENST00000356141 DSCC1Q9BVC3 393 aa20.88■□□□□ 0.93
NPAS3-202ENST00000356141 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
NPAS3-202ENST00000356141 SCRN1Q12765 414 aa20.88■□□□□ 0.93
NPAS3-202ENST00000356141 ADGRA1Q86SQ6 560 aa20.88■□□□□ 0.93
NPAS3-202ENST00000356141 WDR33Q9C0J8 1336 aaKnown RBP20.88■□□□□ 0.93
NPAS3-202ENST00000356141 TPTE2Q6XPS3 522 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 SDR42E1Q8WUS8 393 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 TFIP11Q9UBB9 837 aaKnown RBP20.87■□□□□ 0.93
NPAS3-202ENST00000356141 ZNF213O14771 459 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 KRT27Q7Z3Y8 459 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 TCHHQ07283 1943 aa20.87■□□□□ 0.93
NPAS3-202ENST00000356141 XRCC6P12956 609 aaKnown RBP eCLIP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 KRT32Q14532 448 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 IMMTQ16891 758 aaKnown RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 TBC1D10CQ8IV04 446 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 LCORLQ8N3X6 602 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 DHX32Q7L7V1 743 aaKnown RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 ARID4AP29374 1257 aaPredicted RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 RPS8P62241 208 aaKnown RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 ZSCAN31Q96LW9 406 aaPredicted RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 MYL10Q9BUA6 226 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 SH2B1Q9NRF2 756 aaPredicted RBP20.86■□□□□ 0.93
NPAS3-202ENST00000356141 GJB4Q9NTQ9 266 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 MTMR6Q9Y217 621 aa20.86■□□□□ 0.93
NPAS3-202ENST00000356141 B4E1Z4 1266 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 EVX2Q03828 476 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 OTUD7BQ6GQQ9 843 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 ANKIB1Q9P2G1 1089 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 F13A1P00488 732 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 UQCRFS1P1P0C7P4 283 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 MSL1Q68DK7 614 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.85■□□□□ 0.93
NPAS3-202ENST00000356141 TMEM63CQ9P1W3 806 aa20.85■□□□□ 0.93
NPAS3-202ENST00000356141 DDX60Q8IY21 1712 aaKnown RBP20.85■□□□□ 0.93
NPAS3-202ENST00000356141 SYCE3A1L190 88 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 DYNLL1P63167 89 aaKnown RBP20.84■□□□□ 0.93
NPAS3-202ENST00000356141 NBPF3Q9H094 633 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 AKAP11Q9UKA4 1901 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 CYP2D7A0A087X1C5 515 aa20.84■□□□□ 0.93
NPAS3-202ENST00000356141 PRC1O43663 620 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms