RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ME3Q16798 604 aa30.58■■■□□ 2.49
CLK2-201ENST00000355560 GYG1P46976 350 aa30.57■■■□□ 2.48
CLK2-201ENST00000355560 MAP3K12Q12852 859 aa30.57■■■□□ 2.48
CLK2-201ENST00000355560 TOB2Q14106 344 aaPredicted RBP30.57■■■□□ 2.48
CLK2-201ENST00000355560 TTLL5Q6EMB2 1281 aa30.57■■■□□ 2.48
CLK2-201ENST00000355560 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
CLK2-201ENST00000355560 CCDC83Q8IWF9 413 aa30.56■■■□□ 2.48
CLK2-201ENST00000355560 CTNNA3Q9UI47 895 aa30.56■■■□□ 2.48
CLK2-201ENST00000355560 TCRBV5S4A2TA0A5A2 114 aa30.56■■■□□ 2.48
CLK2-201ENST00000355560 BAG4O95429 457 aaKnown RBP30.56■■■□□ 2.48
CLK2-201ENST00000355560 IQSEC3Q9UPP2 1182 aaPredicted RBP30.55■■■□□ 2.48
CLK2-201ENST00000355560 HMGB1P09429 215 aaKnown RBP30.55■■■□□ 2.48
CLK2-201ENST00000355560 HMGB2P26583 209 aaKnown RBP30.55■■■□□ 2.48
CLK2-201ENST00000355560 DEKP35659 375 aaKnown RBP30.55■■■□□ 2.48
CLK2-201ENST00000355560 CAVIN4Q5BKX8 364 aa30.55■■■□□ 2.48
CLK2-201ENST00000355560 GNL3LQ9NVN8 582 aaKnown RBP30.55■■■□□ 2.48
CLK2-201ENST00000355560 RXRBP28702 533 aa30.54■■■□□ 2.48
CLK2-201ENST00000355560 MAGEB6Q8N7X4 407 aa30.54■■■□□ 2.48
CLK2-201ENST00000355560 E7EWF7 191 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 FGAP02671 866 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 ANKRD2Q9GZV1 360 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 BRD1O95696 1058 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 ST3GAL1Q11201 340 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 IMMTQ16891 758 aaKnown RBP30.53■■■□□ 2.48
CLK2-201ENST00000355560 VPS37DQ86XT2 251 aa30.53■■■□□ 2.48
CLK2-201ENST00000355560 PLSCR1O15162 318 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 APBA3O96018 575 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 GSE1Q14687 1217 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 SMC3Q9UQE7 1217 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 SERPINB2P05120 415 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 NECAB1Q8N987 351 aa30.52■■■□□ 2.48
CLK2-201ENST00000355560 GOLGA6L22H0YM25 854 aa30.51■■■□□ 2.47
CLK2-201ENST00000355560 FOXD4L5Q5VV16 416 aaPredicted RBP30.51■■■□□ 2.47
CLK2-201ENST00000355560 Q6ZUG5 572 aa30.51■■■□□ 2.47
CLK2-201ENST00000355560 FOXD4L4Q8WXT5 416 aaPredicted RBP30.51■■■□□ 2.47
CLK2-201ENST00000355560 AIDAQ96BJ3 306 aa30.51■■■□□ 2.47
CLK2-201ENST00000355560 COL1A1P02452 1464 aaPredicted RBP30.51■■■□□ 2.47
CLK2-201ENST00000355560 TRAK2O60296 914 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 ST5P78524 1137 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 DHX32Q7L7V1 743 aaKnown RBP30.5■■■□□ 2.47
CLK2-201ENST00000355560 FAM84BQ96KN1 310 aaPredicted RBP30.5■■■□□ 2.47
CLK2-201ENST00000355560 HAND2P61296 217 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 GRAPQ13588 217 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 GRAPLQ8TC17 118 aaPredicted RBP30.5■■■□□ 2.47
CLK2-201ENST00000355560 TFCP2L1Q9NZI6 479 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 LRP2BPQ9P2M1 347 aa30.5■■■□□ 2.47
CLK2-201ENST00000355560 KLRK1P26718 216 aa30.49■■■□□ 2.47
CLK2-201ENST00000355560 ZNF827Q17R98 1081 aa30.49■■■□□ 2.47
CLK2-201ENST00000355560 PTMSP20962 102 aa30.48■■■□□ 2.47
CLK2-201ENST00000355560 LRRC2Q9BYS8 371 aa30.48■■■□□ 2.47
CLK2-201ENST00000355560 FGD1P98174 961 aa30.47■■■□□ 2.47
CLK2-201ENST00000355560 DDR1Q08345 913 aa30.47■■■□□ 2.47
CLK2-201ENST00000355560 RPGRQ92834 1020 aaKnown RBP30.47■■■□□ 2.47
CLK2-201ENST00000355560 STRBPQ96SI9 672 aaKnown RBP30.47■■■□□ 2.47
CLK2-201ENST00000355560 APPP05067 770 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 GJB2P29033 226 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 MCTP1Q6DN14 999 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 ABCF2Q9UG63 623 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 DENND2AQ9ULE3 1009 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 MBD4O95243 580 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 FBXO33Q7Z6M2 555 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 BRF1Q92994 677 aa30.46■■■□□ 2.47
CLK2-201ENST00000355560 WDR33Q9C0J8 1336 aaKnown RBP30.46■■■□□ 2.47
CLK2-201ENST00000355560 ZNF213O14771 459 aa30.45■■■□□ 2.47
CLK2-201ENST00000355560 EXOSC10Q01780 885 aaKnown RBP30.45■■■□□ 2.47
CLK2-201ENST00000355560 CRY2Q49AN0 593 aa30.45■■■□□ 2.47
CLK2-201ENST00000355560 MYH13Q9UKX3 1938 aa30.45■■■□□ 2.46
CLK2-201ENST00000355560 POLRMTO00411 1230 aaKnown RBP30.44■■■□□ 2.46
CLK2-201ENST00000355560 STK3Q13188 491 aa30.44■■■□□ 2.46
CLK2-201ENST00000355560 AKT1S1Q96B36 256 aa30.44■■■□□ 2.46
CLK2-201ENST00000355560 DTNBO60941 627 aa30.43■■■□□ 2.46
CLK2-201ENST00000355560 SEMA3EO15041 775 aa30.43■■■□□ 2.46
CLK2-201ENST00000355560 SYT1P21579 422 aa30.43■■■□□ 2.46
CLK2-201ENST00000355560 ARMT1Q9H993 441 aa30.43■■■□□ 2.46
CLK2-201ENST00000355560 ANKIB1Q9P2G1 1089 aa30.43■■■□□ 2.46
CLK2-201ENST00000355560 HIBADHP31937 336 aaKnown RBP30.42■■■□□ 2.46
CLK2-201ENST00000355560 SLC51AQ86UW1 340 aa30.42■■■□□ 2.46
CLK2-201ENST00000355560 RAI14Q9P0K7 980 aa30.42■■■□□ 2.46
CLK2-201ENST00000355560 TNS1Q9HBL0 1735 aaKnown RBP30.42■■■□□ 2.46
CLK2-201ENST00000355560 STX6O43752 255 aa30.41■■■□□ 2.46
CLK2-201ENST00000355560 AGXT2Q9BYV1 514 aa30.41■■■□□ 2.46
CLK2-201ENST00000355560 CHST3Q7LGC8 479 aa30.41■■■□□ 2.46
CLK2-201ENST00000355560 CHAMP1Q96JM3 812 aa30.41■■■□□ 2.46
CLK2-201ENST00000355560 COL23A1Q86Y22 540 aaPredicted RBP30.4■■■□□ 2.46
CLK2-201ENST00000355560 GTF3C6Q969F1 213 aa30.4■■■□□ 2.46
CLK2-201ENST00000355560 LCORLQ8N3X6 602 aa30.4■■■□□ 2.46
CLK2-201ENST00000355560 PNPLA7Q6ZV29 1317 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 PATL2C9JE40 543 aaKnown RBP30.39■■■□□ 2.46
CLK2-201ENST00000355560 CYP7A1P22680 504 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 SKOR2Q2VWA4 1001 aaPredicted RBP30.39■■■□□ 2.46
CLK2-201ENST00000355560 TXNRD3Q86VQ6 643 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 MIGA1Q8NAN2 632 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 NCOA7Q8NI08 942 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 NBPF3Q9H094 633 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 EPB41L4AQ9HCS5 686 aaPredicted RBP30.39■■■□□ 2.46
CLK2-201ENST00000355560 CACNA1SQ13698 1873 aa30.39■■■□□ 2.46
CLK2-201ENST00000355560 ZMYM6O95789 1325 aa30.39■■■□□ 2.45
CLK2-201ENST00000355560 IRS2Q9Y4H2 1338 aa30.39■■■□□ 2.45
CLK2-201ENST00000355560 RALYLQ86SE5 291 aaKnown RBP30.38■■■□□ 2.45
CLK2-201ENST00000355560 RBM17Q96I25 401 aaKnown RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 549.2 ms