RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 KRT79Q5XKE5 535 aa20.25■□□□□ 0.83
CRKL-201ENST00000354336 ZNF622Q969S3 477 aaKnown RBP eCLIP20.25■□□□□ 0.83
CRKL-201ENST00000354336 MAGEB6Q8N7X4 407 aa20.25■□□□□ 0.83
CRKL-201ENST00000354336 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
CRKL-201ENST00000354336 FERMT1Q9BQL6 677 aa20.25■□□□□ 0.83
CRKL-201ENST00000354336 TTLL12Q14166 644 aaPredicted RBP20.25■□□□□ 0.83
CRKL-201ENST00000354336 IKBKGQ9Y6K9 419 aa20.25■□□□□ 0.83
CRKL-201ENST00000354336 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.25■□□□□ 0.831e-7■■■□□ 16.8
CRKL-201ENST00000354336 ZNF804AQ7Z570 1209 aa20.24■□□□□ 0.83
CRKL-201ENST00000354336 UBXN1Q04323 297 aa20.24■□□□□ 0.83
CRKL-201ENST00000354336 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
CRKL-201ENST00000354336 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.24■□□□□ 0.83
CRKL-201ENST00000354336 V9GYY5 206 aaPredicted RBP20.24■□□□□ 0.83
CRKL-201ENST00000354336 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
CRKL-201ENST00000354336 STX17P56962 302 aa20.24■□□□□ 0.83
CRKL-201ENST00000354336 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
CRKL-201ENST00000354336 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
CRKL-201ENST00000354336 DCAF5Q96JK2 942 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 FAM160A1Q05DH4 1040 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 TICAM2Q86XR7 235 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 IQUBQ8NA54 791 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 SMARCC2Q8TAQ2 1214 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 RPS6KB1P23443 525 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
CRKL-201ENST00000354336 ELP1O95163 1332 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
CRKL-201ENST00000354336 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 NSRP1Q9H0G5 558 aaKnown RBP20.22■□□□□ 0.83
CRKL-201ENST00000354336 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 IL2RBP14784 551 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 MYL5Q02045 173 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 KARSQ15046 597 aaKnown RBP20.22■□□□□ 0.83
CRKL-201ENST00000354336 A0A1W2PRG0 241 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 MCM7P33993 719 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 PICALMQ13492 652 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 SYT10Q6XYQ8 523 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 NEK11Q8NG66 645 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.839e-6■□□□□ 10.3
CRKL-201ENST00000354336 MCM9Q9NXL9 1143 aa20.22■□□□□ 0.83
CRKL-201ENST00000354336 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 LZTFL1Q9NQ48 299 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 GUCA1BQ9UMX6 200 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 GNA11P29992 359 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 MPHOSPH6Q99547 160 aaKnown RBP20.21■□□□□ 0.83
CRKL-201ENST00000354336 RBM28Q9NW13 759 aaKnown RBP20.21■□□□□ 0.83
CRKL-201ENST00000354336 AOX1Q06278 1338 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 HOXC9P31274 260 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 HSPA4P34932 840 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 C6orf163Q5TEZ5 329 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 DTHD1Q6ZMT9 781 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 PLCG2P16885 1265 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 ZNF569Q5MCW4 686 aa20.21■□□□□ 0.83
CRKL-201ENST00000354336 CCDC97Q96F63 343 aaPredicted RBP20.21■□□□□ 0.83
CRKL-201ENST00000354336 SHANK2Q9UPX8 1470 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 CPA1P15085 419 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 CNGA4Q8IV77 575 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 LUC7L2Q9Y383 392 aaKnown RBP20.2■□□□□ 0.82
CRKL-201ENST00000354336 CCDC77Q9BR77 488 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 RSPH14Q9UHP6 348 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 G2E3Q7L622 706 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.2■□□□□ 0.82
CRKL-201ENST00000354336 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
CRKL-201ENST00000354336 ACSBG1Q96GR2 724 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 TRPM2O94759 1503 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 F8W031 263 aaPredicted RBP20.2■□□□□ 0.82
CRKL-201ENST00000354336 RXRAP19793 462 aa20.2■□□□□ 0.82
CRKL-201ENST00000354336 A0A1B0GVL5 298 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 TUBBP07437 444 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 ARID5AQ03989 594 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 STMN4Q9H169 189 aaPredicted RBP20.19■□□□□ 0.82
CRKL-201ENST00000354336 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 TNNI2P48788 182 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 MRVI1Q9Y6F6 885 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 ZMYM4Q5VZL5 1548 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
CRKL-201ENST00000354336 SPDYE3A6NKU9 549 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 PPP1R14CQ8TAE6 165 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 OTUD7AQ8TE49 926 aaPredicted RBP20.18■□□□□ 0.82
CRKL-201ENST00000354336 ATRIPQ8WXE1 791 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 CAPZA3Q96KX2 299 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 TSNARE1Q96NA8 513 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 SLC27A2O14975 620 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 PHACTR2O75167 634 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 ZFP91Q96JP5 570 aaPredicted RBP20.18■□□□□ 0.82
CRKL-201ENST00000354336 CCDC94Q9BW85 323 aaPredicted RBP20.18■□□□□ 0.82
CRKL-201ENST00000354336 RBSNQ9H1K0 784 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 ATP2C2O75185 946 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 IP6K1Q92551 441 aa20.18■□□□□ 0.82
CRKL-201ENST00000354336 LLPHQ9BRT6 129 aaKnown RBP20.18■□□□□ 0.82
CRKL-201ENST00000354336 BAG1Q99933 345 aaPredicted RBP20.17■□□□□ 0.82
CRKL-201ENST00000354336 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
CRKL-201ENST00000354336 CAPN2P17655 700 aa20.17■□□□□ 0.82
CRKL-201ENST00000354336 MNAT1P51948 309 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms