RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 SP3Q02447 781 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 SUPT20HL1Q3ZLR7 823 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 CCDC30Q5VVM6 783 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 C15orf52Q6ZUT6 534 aaKnown RBP20.24■□□□□ 0.83
COPE-202ENST00000349893 CERS5Q8N5B7 392 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 ZNF333Q96JL9 665 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 PLA2G12BQ9BX93 195 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
COPE-202ENST00000349893 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
COPE-202ENST00000349893 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
COPE-202ENST00000349893 OTOFQ9HC10 1997 aa20.23■□□□□ 0.83
COPE-202ENST00000349893 SPDYE2BA6NHP3 402 aa20.22■□□□□ 0.83
COPE-202ENST00000349893 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
COPE-202ENST00000349893 USP2O75604 605 aaPredicted RBP20.22■□□□□ 0.83
COPE-202ENST00000349893 SPDYE6P0CI01 402 aa20.22■□□□□ 0.83
COPE-202ENST00000349893 IREB2P48200 963 aaKnown RBP20.22■□□□□ 0.83
COPE-202ENST00000349893 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
COPE-202ENST00000349893 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
COPE-202ENST00000349893 TRIOBPQ9H2D6 2365 aa20.21■□□□□ 0.83
COPE-202ENST00000349893 ITGA6P23229 1130 aa20.21■□□□□ 0.83
COPE-202ENST00000349893 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
COPE-202ENST00000349893 ANKRD13AQ8IZ07 590 aa20.21■□□□□ 0.83
COPE-202ENST00000349893 PCDHAC2Q9Y5I4 1007 aa20.21■□□□□ 0.83
COPE-202ENST00000349893 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
COPE-202ENST00000349893 MYO1BO43795 1136 aa20.2■□□□□ 0.82
COPE-202ENST00000349893 CSF1RP07333 972 aa20.2■□□□□ 0.82
COPE-202ENST00000349893 NEXNQ0ZGT2 675 aa20.2■□□□□ 0.82
COPE-202ENST00000349893 NBPF12Q5TAG4 269 aaPredicted RBP20.2■□□□□ 0.82
COPE-202ENST00000349893 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
COPE-202ENST00000349893 MS4A4AQ96JQ5 239 aa20.2■□□□□ 0.82
COPE-202ENST00000349893 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
COPE-202ENST00000349893 IL1R1P14778 569 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 CASP7P55210 303 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 CHRNDQ07001 517 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 CFAP100Q494V2 611 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 PRMT6Q96LA8 375 aaPredicted RBP20.19■□□□□ 0.82
COPE-202ENST00000349893 MPHOSPH8Q99549 860 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 TMEM106CQ9BVX2 250 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 AOX1Q06278 1338 aa20.19■□□□□ 0.82
COPE-202ENST00000349893 CLRN2A0PK11 232 aa20.17■□□□□ 0.82
COPE-202ENST00000349893 RASA3Q14644 834 aa20.17■□□□□ 0.82
COPE-202ENST00000349893 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
COPE-202ENST00000349893 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
COPE-202ENST00000349893 KCNJ4P48050 445 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 GCKRQ14397 625 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 NBPF11Q86T75 865 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 PTCH2Q9Y6C5 1203 aa20.16■□□□□ 0.82
COPE-202ENST00000349893 APAF1O14727 1248 aa20.15■□□□□ 0.82
COPE-202ENST00000349893 SLC9C1Q4G0N8 1177 aa20.15■□□□□ 0.82
COPE-202ENST00000349893 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
COPE-202ENST00000349893 VEZTQ9HBM0 779 aa20.15■□□□□ 0.82
COPE-202ENST00000349893 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
COPE-202ENST00000349893 SNAP23O00161 211 aa20.14■□□□□ 0.81
COPE-202ENST00000349893 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.14■□□□□ 0.81
COPE-202ENST00000349893 ZNF804AQ7Z570 1209 aa20.14■□□□□ 0.81
COPE-202ENST00000349893 ELP3Q9H9T3 547 aa20.14■□□□□ 0.81
COPE-202ENST00000349893 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
COPE-202ENST00000349893 TNFAIP1Q13829 316 aa20.13■□□□□ 0.81
COPE-202ENST00000349893 SPDYE2Q495Y8 402 aa20.13■□□□□ 0.81
COPE-202ENST00000349893 TEPSINQ96N21 525 aa20.13■□□□□ 0.81
COPE-202ENST00000349893 ZFYVE28Q9HCC9 887 aa20.13■□□□□ 0.81
COPE-202ENST00000349893 ARAP2Q8WZ64 1704 aa20.13■□□□□ 0.81
COPE-202ENST00000349893 H0YGN5 161 aa20.12■□□□□ 0.81
COPE-202ENST00000349893 GTF2A2P52657 109 aa20.12■□□□□ 0.81
COPE-202ENST00000349893 STK31Q9BXU1 1019 aa20.12■□□□□ 0.81
COPE-202ENST00000349893 FAM205AQ6ZU69 1335 aa20.11■□□□□ 0.81
COPE-202ENST00000349893 ANKRD18BA2A2Z9 1011 aa20.11■□□□□ 0.81
COPE-202ENST00000349893 TAF5LO75529 589 aa20.11■□□□□ 0.81
COPE-202ENST00000349893 TAF1CQ15572 869 aaPredicted RBP20.11■□□□□ 0.81
COPE-202ENST00000349893 G2E3Q7L622 706 aa20.11■□□□□ 0.81
COPE-202ENST00000349893 ZNF70Q9UC06 446 aaPredicted RBP20.11■□□□□ 0.81
COPE-202ENST00000349893 SERPINA10Q9UK55 444 aa20.11■□□□□ 0.81
COPE-202ENST00000349893 CCL15-CCL14A0A0B4J2E2 113 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 VGLL4Q14135 290 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 CCL15Q16663 113 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 SLC4A8Q2Y0W8 1093 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.1■□□□□ 0.815e-12■□□□□ 8.3
COPE-202ENST00000349893 CNKSR2Q8WXI2 1034 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 ZCCHC17Q9NP64 241 aaKnown RBP20.1■□□□□ 0.81
COPE-202ENST00000349893 A0A0C4DFX4 3053 aa20.1■□□□□ 0.81
COPE-202ENST00000349893 GNRH1P01148 92 aa20.09■□□□□ 0.81
COPE-202ENST00000349893 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
COPE-202ENST00000349893 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
COPE-202ENST00000349893 LINS1Q8NG48 757 aa20.09■□□□□ 0.81
COPE-202ENST00000349893 COL6A3P12111 3177 aa20.08■□□□□ 0.81
COPE-202ENST00000349893 TLR2O60603 784 aa20.08■□□□□ 0.81
COPE-202ENST00000349893 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.811e-13■■□□□ 14
COPE-202ENST00000349893 MAP3K9P80192 1104 aa20.08■□□□□ 0.81
COPE-202ENST00000349893 FOXO4P98177 505 aa20.08■□□□□ 0.81
COPE-202ENST00000349893 ZSWIM8A7E2V4 1837 aa20.08■□□□□ 0.8
COPE-202ENST00000349893 PRMT2P55345 433 aa20.07■□□□□ 0.8
COPE-202ENST00000349893 LACTBP83111 547 aaPredicted RBP20.07■□□□□ 0.8
COPE-202ENST00000349893 IFIT5Q13325 482 aaKnown RBP20.07■□□□□ 0.8
COPE-202ENST00000349893 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
COPE-202ENST00000349893 SPDYE5A6NIY4 337 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms