RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CERS5Q8N5B7 392 aa27.43■■□□□ 1.98
SNX3-202ENST00000349379 MMP14P50281 582 aa27.42■■□□□ 1.98
SNX3-202ENST00000349379 ZBTB40Q9NUA8 1239 aa27.42■■□□□ 1.98
SNX3-202ENST00000349379 BCAMP50895 628 aa27.41■■□□□ 1.98
SNX3-202ENST00000349379 MYOZ2Q9NPC6 264 aa27.41■■□□□ 1.98
SNX3-202ENST00000349379 ZBTB22O15209 634 aa27.39■■□□□ 1.98
SNX3-202ENST00000349379 TFCP2Q12800 502 aa27.39■■□□□ 1.98
SNX3-202ENST00000349379 RBM26Q5T8P6 1007 aaKnown RBP27.39■■□□□ 1.98
SNX3-202ENST00000349379 IFFO2Q5TF58 517 aa27.39■■□□□ 1.98
SNX3-202ENST00000349379 VPS37DQ86XT2 251 aa27.39■■□□□ 1.98
SNX3-202ENST00000349379 KIAA0825Q8IV33 1275 aa27.39■■□□□ 1.98
SNX3-202ENST00000349379 NOP58Q9Y2X3 529 aaKnown RBP27.39■■□□□ 1.98
SNX3-202ENST00000349379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.39■■□□□ 1.98
SNX3-202ENST00000349379 OGFOD1Q8N543 542 aa27.38■■□□□ 1.97
SNX3-202ENST00000349379 CHMP4BQ9H444 224 aaKnown RBP27.38■■□□□ 1.97
SNX3-202ENST00000349379 JAG2Q9Y219 1238 aa27.38■■□□□ 1.97
SNX3-202ENST00000349379 G3BP1Q13283 466 aaKnown RBP eCLIP27.37■■□□□ 1.97
SNX3-202ENST00000349379 COL1A1P02452 1464 aaPredicted RBP27.37■■□□□ 1.97
SNX3-202ENST00000349379 ZBED3Q96IU2 234 aaPredicted RBP27.36■■□□□ 1.97
SNX3-202ENST00000349379 IQSEC3Q9UPP2 1182 aaPredicted RBP27.36■■□□□ 1.97
SNX3-202ENST00000349379 AKAP2Q9Y2D5 859 aa27.36■■□□□ 1.97
SNX3-202ENST00000349379 HTRA3P83110 453 aa27.35■■□□□ 1.97
SNX3-202ENST00000349379 MFSD14BQ5SR56 506 aa27.35■■□□□ 1.97
SNX3-202ENST00000349379 GLIS2Q9BZE0 524 aaPredicted RBP27.35■■□□□ 1.97
SNX3-202ENST00000349379 HDAC9Q9UKV0 1011 aa27.35■■□□□ 1.97
SNX3-202ENST00000349379 ASTN2O75129 1339 aaPredicted RBP27.35■■□□□ 1.97
SNX3-202ENST00000349379 A0A1B0GUL7 405 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 ADORA1P30542 326 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 RRP1P56182 461 aaKnown RBP27.34■■□□□ 1.97
SNX3-202ENST00000349379 TIMM10P62072 90 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 SCARF1Q14162 830 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 CDC37L1Q7L3B6 337 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 RPAP2Q8IXW5 612 aaPredicted RBP27.34■■□□□ 1.97
SNX3-202ENST00000349379 CREBZFQ9NS37 354 aa27.34■■□□□ 1.97
SNX3-202ENST00000349379 TRAF5O00463 557 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 WNT10BO00744 389 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 SURF6O75683 361 aaKnown RBP27.33■■□□□ 1.97
SNX3-202ENST00000349379 FMR1Q06787 632 aaKnown RBP eCLIP27.33■■□□□ 1.97
SNX3-202ENST00000349379 DNAJC5GQ8N7S2 189 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 MTMR14Q8NCE2 650 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 TBC1D22AQ8WUA7 517 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 GGA3Q9NZ52 723 aa27.33■■□□□ 1.97
SNX3-202ENST00000349379 PHKA1P46020 1223 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 NBPF9Q3BBW0 867 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 SIRT2Q8IXJ6 389 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 GPR108Q9NPR9 543 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 CEP350Q5VT06 3117 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 PITPNM2Q9BZ72 1349 aa27.32■■□□□ 1.96
SNX3-202ENST00000349379 CCDC102BQ68D86 513 aa27.31■■□□□ 1.96
SNX3-202ENST00000349379 DCPSQ96C86 337 aaKnown RBP27.31■■□□□ 1.96
SNX3-202ENST00000349379 XAGE2Q96GT9 111 aa27.31■■□□□ 1.96
SNX3-202ENST00000349379 AKAP11Q9UKA4 1901 aa27.3■■□□□ 1.96
SNX3-202ENST00000349379 TMEM88BA6NKF7 163 aa27.3■■□□□ 1.96
SNX3-202ENST00000349379 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SNX3-202ENST00000349379 FRAT2O75474 233 aaPredicted RBP27.3■■□□□ 1.96
SNX3-202ENST00000349379 CHAF1AQ13111 956 aaPredicted RBP27.3■■□□□ 1.96
SNX3-202ENST00000349379 ANGEL2Q5VTE6 544 aaKnown RBP27.3■■□□□ 1.96
SNX3-202ENST00000349379 F8W031 263 aaPredicted RBP27.29■■□□□ 1.96
SNX3-202ENST00000349379 GRIK5Q16478 980 aa27.29■■□□□ 1.96
SNX3-202ENST00000349379 KRT26Q7Z3Y9 468 aa27.29■■□□□ 1.96
SNX3-202ENST00000349379 GNL3LQ9NVN8 582 aaKnown RBP27.29■■□□□ 1.96
SNX3-202ENST00000349379 CST9Q5W186 159 aa27.28■■□□□ 1.96
SNX3-202ENST00000349379 USP48Q86UV5 1035 aa27.28■■□□□ 1.96
SNX3-202ENST00000349379 TTF2Q9UNY4 1162 aaKnown RBP27.28■■□□□ 1.96
SNX3-202ENST00000349379 SUGT1Q9Y2Z0 365 aa27.28■■□□□ 1.96
SNX3-202ENST00000349379 ADM5C9JUS6 153 aa27.27■■□□□ 1.96
SNX3-202ENST00000349379 OS9Q13438 667 aaPredicted RBP27.27■■□□□ 1.96
SNX3-202ENST00000349379 TNNI3KQ59H18 835 aa27.27■■□□□ 1.96
SNX3-202ENST00000349379 WDR66Q8TBY9 1149 aa27.27■■□□□ 1.96
SNX3-202ENST00000349379 DENND2AQ9ULE3 1009 aa27.27■■□□□ 1.96
SNX3-202ENST00000349379 FPGT-TNNI3KV9GXZ4 949 aa27.27■■□□□ 1.96
SNX3-202ENST00000349379 PDS5AQ29RF7 1337 aaKnown RBP27.26■■□□□ 1.95
SNX3-202ENST00000349379 SALL1Q9NSC2 1324 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 DLGAP5Q15398 846 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 CFAP100Q494V2 611 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 SULF1Q8IWU6 871 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 SERPINA10Q9UK55 444 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 EXOC6BQ9Y2D4 811 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 PCDHAC2Q9Y5I4 1007 aa27.26■■□□□ 1.95
SNX3-202ENST00000349379 SPDYE2BA6NHP3 402 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 HMMRO75330 724 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 SPDYE6P0CI01 402 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 HDLBPQ00341 1268 aaKnown RBP27.25■■□□□ 1.95
SNX3-202ENST00000349379 DLK2Q6UY11 383 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 KLRG1Q96E93 195 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 NEUROD6Q96NK8 337 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 MYH2Q9UKX2 1941 aa27.25■■□□□ 1.95
SNX3-202ENST00000349379 RASGRF1Q13972 1273 aa27.24■■□□□ 1.95
SNX3-202ENST00000349379 CELF2O95319 508 aaKnown RBP27.23■■□□□ 1.95
SNX3-202ENST00000349379 ERC1Q8IUD2 1116 aa27.23■■□□□ 1.95
SNX3-202ENST00000349379 PRMT6Q96LA8 375 aaPredicted RBP27.23■■□□□ 1.95
SNX3-202ENST00000349379 MRIQ9BWK5 157 aa27.23■■□□□ 1.95
SNX3-202ENST00000349379 AOX1Q06278 1338 aa27.22■■□□□ 1.95
SNX3-202ENST00000349379 ARID4AP29374 1257 aaPredicted RBP27.22■■□□□ 1.95
SNX3-202ENST00000349379 HSP90AB4PQ58FF6 505 aa27.22■■□□□ 1.95
SNX3-202ENST00000349379 CNTNAP1P78357 1384 aa27.22■■□□□ 1.95
SNX3-202ENST00000349379 MYO5AQ9Y4I1 1855 aaKnown RBP27.21■■□□□ 1.95
SNX3-202ENST00000349379 CRKP46108 304 aa27.21■■□□□ 1.95
SNX3-202ENST00000349379 MAST3O60307 1309 aa27.2■■□□□ 1.95
SNX3-202ENST00000349379 RASSF10A6NK89 507 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms