RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 CLIP2Q9UDT6 1046 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 A0A087WWV3 80 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 FAM193AP78312 1265 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 CPLX3Q8WVH0 158 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 ATRNO75882 1429 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 CCDC183Q5T5S1 534 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 SNRKQ9NRH2 765 aa12.23□□□□□ -0.45
CAPRIN1-201ENST00000341394 HAND2P61296 217 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 COL15A1P39059 1388 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 ITGA6P23229 1130 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 MCM2P49736 904 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 COPRSQ9NQ92 184 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 PDE8AO60658 829 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 RPS6KA4O75676 772 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 DBNLQ9UJU6 430 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 DDX60Q8IY21 1712 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 ZNF165P49910 485 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 TIMM10P62072 90 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 DACT1Q9NYF0 836 aa12.22□□□□□ -0.45
CAPRIN1-201ENST00000341394 EYA2O00167 538 aa12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 URI1O94763 535 aaPredicted RBP12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 RALYLQ86SE5 291 aaKnown RBP12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 USP26Q9BXU7 913 aa12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 CAMTA2O94983 1202 aa12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
CAPRIN1-201ENST00000341394 LY75O60449 1722 aa12.21□□□□□ -0.46
CAPRIN1-201ENST00000341394 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.46
CAPRIN1-201ENST00000341394 RBM25P49756 843 aaKnown RBP12.21□□□□□ -0.46
CAPRIN1-201ENST00000341394 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.46
CAPRIN1-201ENST00000341394 GREM2Q9H772 168 aa12.21□□□□□ -0.46
CAPRIN1-201ENST00000341394 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 CHMLP26374 656 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 SLFNL1Q499Z3 407 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 MTERF4Q7Z6M4 381 aaKnown RBP12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 HELBQ8NG08 1087 aaPredicted RBP12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 LRRC4BQ9NT99 713 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 PALD1Q9ULE6 856 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 CTSWP56202 376 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 CCDC152Q4G0S7 254 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 SLC51AQ86UW1 340 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 DBNDD2Q9BQY9 259 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
CAPRIN1-201ENST00000341394 MYO5AQ9Y4I1 1855 aaKnown RBP12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 TNNI3KQ59H18 835 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 CCDC158Q5M9N0 1113 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 FPGT-TNNI3KV9GXZ4 949 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 SNAP23O00161 211 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 TRIM29Q14134 588 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
CAPRIN1-201ENST00000341394 PSMA5P28066 241 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 TRDNQ13061 729 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 C4BP0C0L5 1744 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 DNA2P51530 1060 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 AK2P54819 239 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 NAP1L1P55209 391 aaKnown RBP12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 TEX35Q5T0J7 233 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 GPT2Q8TD30 523 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 PTPN21Q16825 1174 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
CAPRIN1-201ENST00000341394 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms