RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SNX21Q969T3 373 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 PRDM11Q9NQV5 511 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 PECAM1P16284 738 aaPredicted RBP19.65■□□□□ 0.74
CDK11B-201ENST00000340677 NEDD9Q14511 834 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 CTCFLQ8NI51 663 aaPredicted RBP19.65■□□□□ 0.74
CDK11B-201ENST00000340677 WDR17Q8IZU2 1322 aa19.64■□□□□ 0.74
CDK11B-201ENST00000340677 RTN2O75298 545 aa19.64■□□□□ 0.74
CDK11B-201ENST00000340677 TRIM42Q8IWZ5 723 aa19.64■□□□□ 0.74
CDK11B-201ENST00000340677 ELOA2Q8IYF1 753 aaPredicted RBP19.64■□□□□ 0.74
CDK11B-201ENST00000340677 CRYMQ14894 314 aa19.64■□□□□ 0.73
CDK11B-201ENST00000340677 TAF7Q15545 349 aaPredicted RBP19.64■□□□□ 0.73
CDK11B-201ENST00000340677 ZNF530Q6P9A1 599 aaPredicted RBP19.64■□□□□ 0.73
CDK11B-201ENST00000340677 TNNQ9UQP3 1299 aa19.64■□□□□ 0.73
CDK11B-201ENST00000340677 SYNRGQ9UMZ2 1314 aa19.64■□□□□ 0.73
CDK11B-201ENST00000340677 TPP2P29144 1249 aaPredicted RBP19.63■□□□□ 0.73
CDK11B-201ENST00000340677 C8orf58Q8NAV2 365 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 RAPGEF4Q8WZA2 1011 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 IVLP07476 585 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 MCM8Q9UJA3 840 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 PYCARDQ9ULZ3 195 aa19.63■□□□□ 0.73
CDK11B-201ENST00000340677 TATP17735 454 aaPredicted RBP19.62■□□□□ 0.73
CDK11B-201ENST00000340677 ACTN2P35609 894 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 CHRNA2Q15822 529 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
CDK11B-201ENST00000340677 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
CDK11B-201ENST00000340677 TSPYL4Q9UJ04 414 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
CDK11B-201ENST00000340677 NAT2P11245 290 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 RAB27AP51159 221 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 ZRSR1Q15695 479 aaKnown RBP19.62■□□□□ 0.73
CDK11B-201ENST00000340677 INF2Q27J81 1249 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 CCDC112Q8NEF3 446 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 PDRG1Q9NUG6 133 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
CDK11B-201ENST00000340677 MEGF6O75095 1541 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 DZIP1LQ8IYY4 767 aaKnown RBP19.61■□□□□ 0.73
CDK11B-201ENST00000340677 BCL2L13Q9BXK5 485 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 A1CFQ9NQ94 594 aaKnown RBP19.61■□□□□ 0.73
CDK11B-201ENST00000340677 V9GYY5 206 aaPredicted RBP19.61■□□□□ 0.73
CDK11B-201ENST00000340677 KIF4AO95239 1232 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 CSB-PGBD3P0DP91 1061 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 TADA2BQ86TJ2 420 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 CCDC125Q86Z20 511 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 REXO1L1PQ8IX06 675 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
CDK11B-201ENST00000340677 PNMA6AP0CW24 399 aaPredicted RBP19.6■□□□□ 0.73
CDK11B-201ENST00000340677 HNRNPH1P31943 449 aaKnown RBP19.6■□□□□ 0.73
CDK11B-201ENST00000340677 USP8P40818 1118 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 PRPHP41219 470 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 USP4Q13107 963 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 JPH2Q9BR39 696 aaPredicted RBP19.6■□□□□ 0.73
CDK11B-201ENST00000340677 KIF9Q9HAQ2 790 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 RBM27Q9P2N5 1060 aaKnown RBP19.6■□□□□ 0.73
CDK11B-201ENST00000340677 IQSEC3Q9UPP2 1182 aaPredicted RBP19.6■□□□□ 0.73
CDK11B-201ENST00000340677 ZBED6P86452 979 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 SLC7A5Q01650 507 aa19.6■□□□□ 0.73
CDK11B-201ENST00000340677 ANKRD18AQ8IVF6 992 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 ZBTB10Q96DT7 871 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 PLCH1Q4KWH8 1693 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 MYL1P05976 194 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 TRIM27P14373 513 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 AK7Q96M32 723 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 NOB1Q9ULX3 412 aaKnown RBP19.59■□□□□ 0.73
CDK11B-201ENST00000340677 MRC1P22897 1456 aa19.59■□□□□ 0.73
CDK11B-201ENST00000340677 SYCE3A1L190 88 aa19.58■□□□□ 0.73
CDK11B-201ENST00000340677 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.73
CDK11B-201ENST00000340677 MVPQ14764 893 aaKnown RBP19.58■□□□□ 0.73
CDK11B-201ENST00000340677 SPC24Q8NBT2 197 aa19.58■□□□□ 0.73
CDK11B-201ENST00000340677 KAT2BQ92831 832 aa19.58■□□□□ 0.73
CDK11B-201ENST00000340677 TAX1BP1Q86VP1 789 aa19.58■□□□□ 0.72
CDK11B-201ENST00000340677 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDK11B-201ENST00000340677 PCDHB15Q9Y5E8 787 aa19.58■□□□□ 0.72
CDK11B-201ENST00000340677 ANKRD65E5RJM6 399 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 ZNF24P17028 368 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 RDXP35241 583 aaKnown RBP19.57■□□□□ 0.72
CDK11B-201ENST00000340677 GCKP35557 465 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 ELF2Q15723 593 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 TSNAXIP1Q2TAA8 658 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 HOXB7P09629 217 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 RLBP1P12271 317 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 MYSM1Q5VVJ2 828 aa19.57■□□□□ 0.72
CDK11B-201ENST00000340677 NUTM1Q86Y26 1132 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 PSD3Q9NYI0 1048 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 SCRN1Q12765 414 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 FOXR1Q6PIV2 292 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 IQCF2Q8IXL9 164 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 API5Q9BZZ5 524 aaKnown RBP19.56■□□□□ 0.72
CDK11B-201ENST00000340677 LMBRD1Q9NUN5 540 aa19.56■□□□□ 0.72
CDK11B-201ENST00000340677 WNK3Q9BYP7 1800 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 N4BP2Q86UW6 1770 aaPredicted RBP19.55■□□□□ 0.72
CDK11B-201ENST00000340677 E2F5Q15329 346 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 TTC30AQ86WT1 665 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 DDX19BQ9UMR2 479 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
CDK11B-201ENST00000340677 FAM200BP0CF97 657 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms