RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
TRIM2-201ENST00000338700 PLS1Q14651 629 aa8.82□□□□□ -1
TRIM2-201ENST00000338700 SPDYE3A6NKU9 549 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 KRT13P13646 458 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 IFI16Q16666 785 aaKnown RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 TMC6Q7Z403 805 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 SKAP1Q86WV1 359 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 NAA15Q9BXJ9 866 aaKnown RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 CGNQ9P2M7 1197 aaKnown RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 MACROD2A1Z1Q3 448 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 TFCP2Q12800 502 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 ZSCAN30Q86W11 494 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 GOPCQ9HD26 462 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 BABAM1Q9NWV8 329 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 PTPRMP28827 1452 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 GCOM1H8Y6P7 765 aaPredicted RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 URI1O94763 535 aaPredicted RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 MYZAPP0CAP1 466 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 PPM1FP49593 454 aaPredicted RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 CWF19L2Q2TBE0 894 aaKnown RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 NIM1KQ8IY84 436 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 NECAB1Q8N987 351 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 FBXO41Q8TF61 875 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 DYDC1Q8WWB3 177 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 TMX3Q96JJ7 454 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 GOLGA6L9A6NEM1 432 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 ESPNB1AK53 854 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 RRAGBQ5VZM2 374 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 TMCO3Q6UWJ1 677 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 BIN2Q9UBW5 565 aaPredicted RBP8.81□□□□□ -1
TRIM2-201ENST00000338700 TMCO5BA8MYB1 307 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 TBC1D32Q96NH3 1257 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 LRRC2Q9BYS8 371 aa8.81□□□□□ -1
TRIM2-201ENST00000338700 IFFO1Q0D2I5 559 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 SH2D4AQ9H788 454 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 DDX21Q9NR30 783 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM2-201ENST00000338700 NCBP1Q09161 790 aaKnown RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 PLBD2Q8NHP8 589 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 CTAGE1Q96RT6 745 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 PPFIA3O75145 1194 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 KRT2P35908 639 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 DNA2P51530 1060 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 TTC6Q86TZ1 520 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 HELBQ8NG08 1087 aaPredicted RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 CCDC113Q9H0I3 377 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 PHACTR2O75167 634 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 NOP2P46087 812 aaKnown RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 BICC1Q9H694 974 aaKnown RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 MMRN2Q9H8L6 949 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 KIF1BO60333 1816 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 VAMP4O75379 141 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 MIGA1Q8NAN2 632 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 PLCD4Q9BRC7 762 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 RBM28Q9NW13 759 aaKnown RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM2-201ENST00000338700 ERVV-2B6SEH9 535 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 CEP85Q6P2H3 762 aa8.8□□□□□ -1
TRIM2-201ENST00000338700 NAP1L4Q99733 375 aaKnown RBP8.8□□□□□ -1
TRIM2-201ENST00000338700 KIAA0232Q92628 1395 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 RAD50Q92878 1312 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 UVSSAQ2YD98 709 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 RIMS1Q86UR5 1692 aaKnown RBP8.79□□□□□ -1
TRIM2-201ENST00000338700 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 N4BP3O15049 544 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 ISM2Q6H9L7 571 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 POTEB2H3BUK9 544 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 GNA11P29992 359 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 AFMP43652 599 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 ZNF165P49910 485 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 MAP2K1Q02750 393 aaPredicted RBP8.79□□□□□ -1
TRIM2-201ENST00000338700 SYNCQ9H7C4 482 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 USP25Q9UHP3 1055 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 SHROOM2Q13796 1616 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 H7C1D1 291 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 CA8P35219 290 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 TCIRG1Q13488 830 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 HELLSQ9NRZ9 838 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 METP08581 1390 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 MAST3O60307 1309 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 ERICH4A6NGS2 130 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 TRIM75PA6NK02 468 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 ZNF790Q6PG37 636 aa8.79□□□□□ -1
TRIM2-201ENST00000338700 GTPBP4Q9BZE4 634 aaKnown RBP8.79□□□□□ -1
TRIM2-201ENST00000338700 CCDC171Q6TFL3 1326 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 UFL1O94874 794 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 KRT79Q5XKE5 535 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 DPP8Q6V1X1 898 aaPredicted RBP8.78□□□□□ -1
TRIM2-201ENST00000338700 MRPS27Q92552 414 aaKnown RBP8.78□□□□□ -1
TRIM2-201ENST00000338700 LRRC45Q96CN5 670 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 HOOK2Q96ED9 719 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 TTC12Q9H892 705 aaPredicted RBP8.78□□□□□ -1
TRIM2-201ENST00000338700 MAP3K4Q9Y6R4 1608 aa8.78□□□□□ -1
TRIM2-201ENST00000338700 PDE8AO60658 829 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms