RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 MYOZ2Q9NPC6 264 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 GNL3LQ9NVN8 582 aaKnown RBP14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 PGAP2Q9UHJ9 254 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 COG6Q9Y2V7 657 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 SCN9AQ15858 1988 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 SHTN1A0MZ66 631 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 ITGBL1O95965 494 aaPredicted RBP14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 HIRAP54198 1017 aaPredicted RBP14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 CDC37L1Q7L3B6 337 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 TBC1D22AQ8WUA7 517 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 FAM205AQ6ZU69 1335 aa14.01□□□□□ -0.17
SLC28A1-202ENST00000338602 KIAA0825Q8IV33 1275 aa14□□□□□ -0.17
SLC28A1-202ENST00000338602 SSH3Q8TE77 659 aa14□□□□□ -0.17
SLC28A1-202ENST00000338602 MXD3Q9BW11 206 aa14□□□□□ -0.17
SLC28A1-202ENST00000338602 PSME4Q14997 1843 aa14□□□□□ -0.17
SLC28A1-202ENST00000338602 TMEM88BA6NKF7 163 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 BCAMP50895 628 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 TFCP2Q12800 502 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 POLA2Q14181 598 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 MFSD14BQ5SR56 506 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 SULF1Q8IWU6 871 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 PRDM10Q9NQV6 1147 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 PASKQ96RG2 1323 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
SLC28A1-202ENST00000338602 HMMRO75330 724 aa13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 CHAF1AQ13111 956 aaPredicted RBP13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 SCARF1Q14162 830 aa13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 CEP85Q6P2H3 762 aa13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
SLC28A1-202ENST00000338602 SEMA3EO15041 775 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 EGFRP00533 1210 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 ZBTB40Q9NUA8 1239 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 GGA3Q9NZ52 723 aa13.97□□□□□ -0.17
SLC28A1-202ENST00000338602 A0A1B0GUL7 405 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 F8W031 263 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 MYO1BO43795 1136 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 TIMM10P62072 90 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 GLIS2Q9BZE0 524 aaPredicted RBP13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 SUGT1Q9Y2Z0 365 aa13.96□□□□□ -0.17
SLC28A1-202ENST00000338602 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 XAGE2Q96GT9 111 aa13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 GPR108Q9NPR9 543 aa13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 PITPNM2Q9BZ72 1349 aa13.96□□□□□ -0.18
SLC28A1-202ENST00000338602 MAST3O60307 1309 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 TRAF5O00463 557 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 WNT10BO00744 389 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 FOXN1O15353 648 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 RRP1P56182 461 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 CFAP100Q494V2 611 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 C20orf194Q5TEA3 1177 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 CCDC102BQ68D86 513 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 SERPINA10Q9UK55 444 aa13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 ABT1Q9ULW3 272 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-202ENST00000338602 ZBTB22O15209 634 aa13.94□□□□□ -0.18
SLC28A1-202ENST00000338602 ADORA1P30542 326 aa13.94□□□□□ -0.18
SLC28A1-202ENST00000338602 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
SLC28A1-202ENST00000338602 APOBEC3FQ8IUX4 373 aaKnown RBP13.94□□□□□ -0.18
SLC28A1-202ENST00000338602 ZNF408Q9H9D4 720 aa13.94□□□□□ -0.18
SLC28A1-202ENST00000338602 PHKA1P46020 1223 aa13.93□□□□□ -0.18
SLC28A1-202ENST00000338602 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
SLC28A1-202ENST00000338602 CCDC158Q5M9N0 1113 aa13.93□□□□□ -0.18
SLC28A1-202ENST00000338602 ABHD8Q96I13 439 aa13.93□□□□□ -0.18
SLC28A1-202ENST00000338602 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 UQCRFS1P1P0C7P4 283 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 C2orf69Q8N8R5 385 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 MRIQ9BWK5 157 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
SLC28A1-202ENST00000338602 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-202ENST00000338602 RAB11FIP3O75154 756 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms