RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 JADE2Q9NQC1 790 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 TXNDC16Q9P2K2 825 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
FN1-202ENST00000336916 N4BP3O15049 544 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 KRT79Q5XKE5 535 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
FN1-202ENST00000336916 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
FN1-202ENST00000336916 MAP2P11137 1827 aaKnown RBP13.88□□□□□ -0.19
FN1-202ENST00000336916 ZNF165P49910 485 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 A0A1W2PRG0 241 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 HSF2BPO75031 334 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 ALDH1B1P30837 517 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
FN1-202ENST00000336916 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
FN1-202ENST00000336916 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
FN1-202ENST00000336916 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 CTAGE9A4FU28 777 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
FN1-202ENST00000336916 KRT86O43790 486 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
FN1-202ENST00000336916 VWA3BQ502W6 1294 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 DDX23Q9BUQ8 820 aaKnown RBP13.87□□□□□ -0.19
FN1-202ENST00000336916 CEP135Q66GS9 1140 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 F6X3S4 739 aa13.87□□□□□ -0.19
FN1-202ENST00000336916 AKR1B10O60218 316 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 VIMP08670 466 aaKnown RBP13.86□□□□□ -0.19
FN1-202ENST00000336916 UBASH3AP57075 661 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 MAK16Q9BXY0 300 aaKnown RBP13.86□□□□□ -0.19
FN1-202ENST00000336916 STK32BQ9NY57 414 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 TCHPQ9BT92 498 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 ZMYM3Q14202 1370 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 SNW1Q13573 536 aaKnown RBP13.86□□□□□ -0.19
FN1-202ENST00000336916 CLASP1Q7Z460 1538 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 TET3O43151 1660 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
FN1-202ENST00000336916 CA8P35219 290 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 SBNO1A3KN83 1393 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 THUMPD2Q9BTF0 503 aaKnown RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 ALDH3A1P30838 453 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 ZSCAN22P10073 491 aaPredicted RBP13.85□□□□□ -0.19
FN1-202ENST00000336916 SLC9C2Q5TAH2 1124 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 IFT74Q96LB3 600 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 PLCD4Q9BRC7 762 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 HELLSQ9NRZ9 838 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 AOX1Q06278 1338 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 TACC1O75410 805 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 FERMT3Q86UX7 667 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 SPC25Q9HBM1 224 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
FN1-202ENST00000336916 IP6K1Q92551 441 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 SMARCA5O60264 1052 aaPredicted RBP13.84□□□□□ -0.19
FN1-202ENST00000336916 ATP5DP30049 168 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 COPS6Q7L5N1 327 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 LLPHQ9BRT6 129 aaKnown RBP13.84□□□□□ -0.19
FN1-202ENST00000336916 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 MYH10P35580 1976 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 LIG1P18858 919 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 PLCD1P51178 756 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 STK10O94804 968 aaKnown RBP13.84□□□□□ -0.19
FN1-202ENST00000336916 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 IQCDQ96DY2 449 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
FN1-202ENST00000336916 H0YIN7 160 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 TRIM14Q14142 442 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 WDR44Q5JSH3 913 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 VEZTQ9HBM0 779 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 CALCOCO1Q9P1Z2 691 aa13.83□□□□□ -0.19
FN1-202ENST00000336916 SYNMO15061 1565 aa13.83□□□□□ -0.2
FN1-202ENST00000336916 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
FN1-202ENST00000336916 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
FN1-202ENST00000336916 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
FN1-202ENST00000336916 BCCIPQ9P287 314 aaKnown RBP eCLIP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms