RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LMBR1LQ6UX01 489 aa27.44■■□□□ 1.98
TSKU-201ENST00000333090 GPHNQ9NQX3 736 aaPredicted RBP27.44■■□□□ 1.98
TSKU-201ENST00000333090 A0A0U1RQG5 324 aaPredicted RBP27.44■■□□□ 1.98
TSKU-201ENST00000333090 PODXL2Q9NZ53 605 aa27.44■■□□□ 1.98
TSKU-201ENST00000333090 SLC3A2P08195 630 aaKnown RBP27.43■■□□□ 1.98
TSKU-201ENST00000333090 TTLL5Q6EMB2 1281 aa27.43■■□□□ 1.98
TSKU-201ENST00000333090 PALLDQ8WX93 1383 aa27.43■■□□□ 1.98
TSKU-201ENST00000333090 TIMM10P62072 90 aa27.43■■□□□ 1.98
TSKU-201ENST00000333090 ZMYM1Q5SVZ6 1142 aa27.43■■□□□ 1.98
TSKU-201ENST00000333090 SLC52A2Q9HAB3 445 aa27.43■■□□□ 1.98
TSKU-201ENST00000333090 PSDA5PKW4 1024 aaPredicted RBP27.42■■□□□ 1.98
TSKU-201ENST00000333090 NRDCO43847 1150 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 KCNG4Q8TDN1 519 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 TPM4P67936 248 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 HOMER1Q86YM7 354 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 C8orf76Q96K31 380 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 BPIFA3Q9BQP9 254 aa27.42■■□□□ 1.98
TSKU-201ENST00000333090 NEDD4P46934 1319 aa27.41■■□□□ 1.98
TSKU-201ENST00000333090 SPTLC2O15270 562 aa27.41■■□□□ 1.98
TSKU-201ENST00000333090 MAST3O60307 1309 aa27.41■■□□□ 1.98
TSKU-201ENST00000333090 LMOD1P29536 600 aaPredicted RBP27.41■■□□□ 1.98
TSKU-201ENST00000333090 ISM2Q6H9L7 571 aa27.41■■□□□ 1.98
TSKU-201ENST00000333090 GORABQ5T7V8 394 aa27.4■■□□□ 1.98
TSKU-201ENST00000333090 SIPA1L3O60292 1781 aaPredicted RBP27.4■■□□□ 1.98
TSKU-201ENST00000333090 ZNF202O95125 648 aa27.4■■□□□ 1.98
TSKU-201ENST00000333090 H2AFXP16104 143 aaPredicted RBP27.4■■□□□ 1.98
TSKU-201ENST00000333090 LRP10Q7Z4F1 713 aa27.4■■□□□ 1.98
TSKU-201ENST00000333090 GJB4Q9NTQ9 266 aa27.4■■□□□ 1.98
TSKU-201ENST00000333090 ABCC6O95255 1503 aa27.39■■□□□ 1.98
TSKU-201ENST00000333090 CCDC93Q567U6 631 aa27.39■■□□□ 1.98
TSKU-201ENST00000333090 CHMP4CQ96CF2 233 aa27.39■■□□□ 1.98
TSKU-201ENST00000333090 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.39■■□□□ 1.98
TSKU-201ENST00000333090 NLRP12P59046 1061 aa27.39■■□□□ 1.97
TSKU-201ENST00000333090 NCAPHQ15003 741 aa27.39■■□□□ 1.97
TSKU-201ENST00000333090 RAB11FIP4Q86YS3 637 aa27.39■■□□□ 1.97
TSKU-201ENST00000333090 POLR3EQ9NVU0 708 aa27.39■■□□□ 1.97
TSKU-201ENST00000333090 C5P01031 1676 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 ERICH4A6NGS2 130 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 YEATS4O95619 227 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 BMS1Q14692 1282 aaKnown RBP27.38■■□□□ 1.97
TSKU-201ENST00000333090 ARHGAP29Q52LW3 1261 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 MYSM1Q5VVJ2 828 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 HAND2P61296 217 aa27.38■■□□□ 1.97
TSKU-201ENST00000333090 CLCN6P51797 869 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 SYNE3Q6ZMZ3 975 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 ATP1A3P13637 1013 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 FANCCQ00597 558 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 FBXO18Q8NFZ0 1043 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 ORC3Q9UBD5 711 aaPredicted RBP27.37■■□□□ 1.97
TSKU-201ENST00000333090 DNAI1Q9UI46 699 aa27.37■■□□□ 1.97
TSKU-201ENST00000333090 PHRF1Q9P1Y6 1649 aaKnown RBP27.36■■□□□ 1.97
TSKU-201ENST00000333090 M0R2C6 588 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 RNF113AO15541 343 aaKnown RBP27.36■■□□□ 1.97
TSKU-201ENST00000333090 IFIT1P09914 478 aaKnown RBP27.36■■□□□ 1.97
TSKU-201ENST00000333090 ATG9AQ7Z3C6 839 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 RAPGEF4Q8WZA2 1011 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 SNRPA1P09661 255 aaKnown RBP27.36■■□□□ 1.97
TSKU-201ENST00000333090 CSB-PGBD3P0DP91 1061 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 KCNJ6P48051 423 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 TTC5Q8N0Z6 440 aa27.36■■□□□ 1.97
TSKU-201ENST00000333090 CCDC66A2RUB6 948 aa27.35■■□□□ 1.97
TSKU-201ENST00000333090 PFKFB1P16118 471 aa27.35■■□□□ 1.97
TSKU-201ENST00000333090 GOLGA8BA8MQT2 603 aa27.35■■□□□ 1.97
TSKU-201ENST00000333090 CASP7P55210 303 aa27.35■■□□□ 1.97
TSKU-201ENST00000333090 ETF1P62495 437 aaKnown RBP27.35■■□□□ 1.97
TSKU-201ENST00000333090 RGPD5Q99666 1765 aa27.34■■□□□ 1.97
TSKU-201ENST00000333090 KLF18A0A0U1RQI7 1052 aa27.34■■□□□ 1.97
TSKU-201ENST00000333090 FHOD1Q9Y613 1164 aa27.34■■□□□ 1.97
TSKU-201ENST00000333090 KDM6AO15550 1401 aaPredicted RBP27.34■■□□□ 1.97
TSKU-201ENST00000333090 CPLX1O14810 134 aa27.34■■□□□ 1.97
TSKU-201ENST00000333090 TAOK2Q9UL54 1235 aa27.34■■□□□ 1.97
TSKU-201ENST00000333090 KIF28PB7ZC32 967 aa27.33■■□□□ 1.97
TSKU-201ENST00000333090 MARCKSP29966 332 aaPredicted RBP27.33■■□□□ 1.97
TSKU-201ENST00000333090 BRAPQ7Z569 592 aa27.33■■□□□ 1.97
TSKU-201ENST00000333090 OSBP2Q969R2 916 aa27.33■■□□□ 1.97
TSKU-201ENST00000333090 DHX8Q14562 1220 aaKnown RBP27.33■■□□□ 1.97
TSKU-201ENST00000333090 ANO1Q5XXA6 986 aa27.33■■□□□ 1.97
TSKU-201ENST00000333090 NOL10Q9BSC4 688 aaKnown RBP27.33■■□□□ 1.97
TSKU-201ENST00000333090 DHX16O60231 1041 aaKnown RBP27.32■■□□□ 1.96
TSKU-201ENST00000333090 EVCP57679 992 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 AXDND1Q5T1B0 1012 aaPredicted RBP27.32■■□□□ 1.96
TSKU-201ENST00000333090 FOXO4P98177 505 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 UBXN4Q92575 508 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
TSKU-201ENST00000333090 MROH7-TTC4A0A0A0MT08 1334 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 PRC1O43663 620 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 TUBB4AP04350 444 aa27.32■■□□□ 1.96
TSKU-201ENST00000333090 FKBP4Q02790 459 aaKnown RBP eCLIP27.32■■□□□ 1.96
TSKU-201ENST00000333090 SERPINC1P01008 464 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 PHKG2P15735 406 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 CMA1P23946 247 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 C1orf167Q5SNV9 1468 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 PNMA6AP0CW24 399 aaPredicted RBP27.31■■□□□ 1.96
TSKU-201ENST00000333090 UBASH3AP57075 661 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 LRRC24Q50LG9 513 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 DPF2Q92785 391 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 HSD3B7Q9H2F3 369 aa27.31■■□□□ 1.96
TSKU-201ENST00000333090 IKBKBO14920 756 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
TSKU-201ENST00000333090 WASHC4Q2M389 1173 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms