RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 HSP90AB3PQ58FF7 597 aa9.14□□□□□ -0.95
VMA21-201ENST00000330374 RETREG2Q8NC44 543 aa9.14□□□□□ -0.95
VMA21-201ENST00000330374 LINS1Q8NG48 757 aa9.14□□□□□ -0.95
VMA21-201ENST00000330374 ARGLU1Q9NWB6 273 aaPredicted RBP9.14□□□□□ -0.95
VMA21-201ENST00000330374 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
VMA21-201ENST00000330374 MCMDC2Q4G0Z9 681 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 ILDR1Q86SU0 546 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 DPF2Q92785 391 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 KIF2AO00139 706 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 FANCCQ00597 558 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 DHX32Q7L7V1 743 aaKnown RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 UBE3BQ7Z3V4 1068 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 PFKFB2O60825 505 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 DDX58O95786 925 aaKnown RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 H2AFXP16104 143 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 CAPN2P17655 700 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 EVCP57679 992 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
VMA21-201ENST00000330374 RGPD1P0DJD0 1748 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 IGKV5-2P06315 115 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 CCDC150Q8NCX0 1101 aa9.13□□□□□ -0.95
VMA21-201ENST00000330374 ZNF609O15014 1411 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 UBASH3AP57075 661 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
VMA21-201ENST00000330374 TNNI3KQ59H18 835 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 HDAC5Q9UQL6 1122 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 FPGT-TNNI3KV9GXZ4 949 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 TMEM232C9JQI7 657 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 NAA16Q6N069 864 aaPredicted RBP9.12□□□□□ -0.95
VMA21-201ENST00000330374 SMARCC2Q8TAQ2 1214 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 ORC3Q9UBD5 711 aaPredicted RBP9.12□□□□□ -0.95
VMA21-201ENST00000330374 ZNF202O95125 648 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 CYP2C19P33261 490 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 GNG11P61952 73 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 TIMM10P62072 90 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 C8orf76Q96K31 380 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 OSBPL5Q9H0X9 879 aaPredicted RBP9.12□□□□□ -0.95
VMA21-201ENST00000330374 SNRKQ9NRH2 765 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 SPATA31D1Q6ZQQ2 1576 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 SPTLC2O15270 562 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 OAS2P29728 719 aaKnown RBP9.12□□□□□ -0.95
VMA21-201ENST00000330374 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 POLR3EQ9NVU0 708 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
VMA21-201ENST00000330374 NRXN3Q9Y4C0 1643 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 CPLX1O14810 134 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 RXRAP19793 462 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 PDIA3P30101 505 aaKnown RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 SETD1AO15047 1707 aaKnown RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 RICTORQ6R327 1708 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 E7EWF7 191 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 TNNT3P45378 269 aaPredicted RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 CERS3Q8IU89 383 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 FANCGO15287 622 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 PLEKHO1Q53GL0 409 aaPredicted RBP9.11□□□□□ -0.95
VMA21-201ENST00000330374 IMPACTQ9P2X3 320 aa9.11□□□□□ -0.95
VMA21-201ENST00000330374 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 PNOCQ13519 176 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 SPECC1Q5M775 1068 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 USPL1Q5W0Q7 1092 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 LINC00301Q8NCQ3 95 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 AIFM3Q96NN9 605 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 DESI2Q9BSY9 194 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 BIN2Q9UBW5 565 aaPredicted RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 CARMIL3Q8ND23 1372 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 TOP1P11387 765 aaKnown RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 PFKFB1P16118 471 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 ATP5JP18859 108 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
VMA21-201ENST00000330374 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 TSGA10IPQ3SY00 556 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 CCDC93Q567U6 631 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 C10orf67Q8IYJ2 551 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 ALDH8A1Q9H2A2 487 aaPredicted RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 GOLGA8BA8MQT2 603 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 SASH3O75995 380 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 FDPSP14324 419 aaKnown RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 LMAN1P49257 510 aa9.1□□□□□ -0.95
VMA21-201ENST00000330374 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
VMA21-201ENST00000330374 NEURL1BA8MQ27 555 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms