RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CARMIL3Q8ND23 1372 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 MYH3P11055 1940 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 PRC1O43663 620 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 NR1I2O75469 434 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 CAVIN2O95810 425 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 UQCRFS1P1P0C7P4 283 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 RALYLQ86SE5 291 aaKnown RBP26.22■■□□□ 1.79
PNKP-201ENST00000322344 DZIP3Q86Y13 1208 aaKnown RBP26.22■■□□□ 1.79
PNKP-201ENST00000322344 MYH7P12883 1935 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 MYH15Q9Y2K3 1946 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 HAND2P61296 217 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 UBE3CQ15386 1083 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 SASS6Q6UVJ0 657 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 CKAP2LQ8IYA6 745 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 ZNF34Q8IZ26 560 aa26.21■■□□□ 1.79
PNKP-201ENST00000322344 KDM4FA0A1W2PPD8 638 aa26.2■■□□□ 1.78
PNKP-201ENST00000322344 CTAGE5O15320 804 aa26.2■■□□□ 1.78
PNKP-201ENST00000322344 PI16Q6UXB8 463 aa26.2■■□□□ 1.78
PNKP-201ENST00000322344 LRP5O75197 1615 aa26.2■■□□□ 1.78
PNKP-201ENST00000322344 GOLGA6L6A8MZA4 724 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 ARID4AP29374 1257 aaPredicted RBP26.19■■□□□ 1.78
PNKP-201ENST00000322344 PLCB2Q00722 1185 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 RGS22Q8NE09 1264 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 MROH5Q6ZUA9 1318 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 ANO6Q4KMQ2 910 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 PIBF1Q8WXW3 757 aa26.19■■□□□ 1.78
PNKP-201ENST00000322344 CDCA7Q9BWT1 371 aaPredicted RBP26.19■■□□□ 1.78
PNKP-201ENST00000322344 COL22A1Q8NFW1 1626 aaPredicted RBP26.18■■□□□ 1.78
PNKP-201ENST00000322344 NUP98P52948 1817 aa26.18■■□□□ 1.78
PNKP-201ENST00000322344 SYTL4Q96C24 671 aaPredicted RBP26.18■■□□□ 1.78
PNKP-201ENST00000322344 TBC1D2BQ9UPU7 963 aa26.18■■□□□ 1.78
PNKP-201ENST00000322344 R3HCC1Q9Y3T6 440 aaKnown RBP26.18■■□□□ 1.78
PNKP-201ENST00000322344 AKAP11Q9UKA4 1901 aa26.18■■□□□ 1.78
PNKP-201ENST00000322344 AP5Z1O43299 807 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 FDPSP14324 419 aaKnown RBP26.17■■□□□ 1.78
PNKP-201ENST00000322344 PUM3Q15397 648 aaKnown RBP26.17■■□□□ 1.78
PNKP-201ENST00000322344 SLC9C2Q5TAH2 1124 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 LPIN2Q92539 896 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 WNK3Q9BYP7 1800 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 KLF18A0A0U1RQI7 1052 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 FOSBP53539 338 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 TRDNQ13061 729 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 USP28Q96RU2 1077 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 CBX8Q9HC52 389 aa26.17■■□□□ 1.78
PNKP-201ENST00000322344 UBN2Q6ZU65 1347 aa26.16■■□□□ 1.78
PNKP-201ENST00000322344 CCDC102BQ68D86 513 aa26.16■■□□□ 1.78
PNKP-201ENST00000322344 CCAR1Q8IX12 1150 aaKnown RBP26.16■■□□□ 1.78
PNKP-201ENST00000322344 DDX60Q8IY21 1712 aaKnown RBP26.16■■□□□ 1.78
PNKP-201ENST00000322344 GOLGA8BA8MQT2 603 aa26.15■■□□□ 1.78
PNKP-201ENST00000322344 ANTXR2P58335 489 aa26.15■■□□□ 1.78
PNKP-201ENST00000322344 CCDC73Q6ZRK6 1079 aa26.15■■□□□ 1.78
PNKP-201ENST00000322344 PIH1D3Q9NQM4 214 aaKnown RBP26.15■■□□□ 1.78
PNKP-201ENST00000322344 COL16A1Q07092 1604 aaPredicted RBP26.15■■□□□ 1.78
PNKP-201ENST00000322344 FGFR2P21802 821 aa26.15■■□□□ 1.78
PNKP-201ENST00000322344 CEBPZQ03701 1054 aaKnown RBP26.15■■□□□ 1.78
PNKP-201ENST00000322344 TDRD7Q8NHU6 1098 aaKnown RBP26.15■■□□□ 1.78
PNKP-201ENST00000322344 GPHNQ9NQX3 736 aaPredicted RBP26.15■■□□□ 1.78
PNKP-201ENST00000322344 HPS5Q9UPZ3 1129 aa26.14■■□□□ 1.78
PNKP-201ENST00000322344 EIF5P55010 431 aaKnown RBP26.14■■□□□ 1.77
PNKP-201ENST00000322344 ILDR1Q86SU0 546 aaPredicted RBP26.14■■□□□ 1.77
PNKP-201ENST00000322344 LUZP1Q86V48 1076 aa26.14■■□□□ 1.77
PNKP-201ENST00000322344 C8orf76Q96K31 380 aa26.14■■□□□ 1.77
PNKP-201ENST00000322344 TTC12Q9H892 705 aaPredicted RBP26.14■■□□□ 1.77
PNKP-201ENST00000322344 RTEL1Q9NZ71 1219 aa26.14■■□□□ 1.77
PNKP-201ENST00000322344 AHDC1Q5TGY3 1603 aaPredicted RBP26.13■■□□□ 1.77
PNKP-201ENST00000322344 ARAP2Q8WZ64 1704 aa26.13■■□□□ 1.77
PNKP-201ENST00000322344 IDH1O75874 414 aaKnown RBP26.13■■□□□ 1.77
PNKP-201ENST00000322344 PDE6AP16499 860 aa26.13■■□□□ 1.77
PNKP-201ENST00000322344 PHKA1P46020 1223 aa26.13■■□□□ 1.77
PNKP-201ENST00000322344 ZNF532Q9HCE3 1301 aa26.13■■□□□ 1.77
PNKP-201ENST00000322344 CPLX1O14810 134 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 SLC5A1P13866 664 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 GUCY1B3Q02153 619 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 ZNF830Q96NB3 372 aaPredicted RBP26.12■■□□□ 1.77
PNKP-201ENST00000322344 ORC3Q9UBD5 711 aaPredicted RBP26.12■■□□□ 1.77
PNKP-201ENST00000322344 ZMYM6O95789 1325 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 ZNF165P49910 485 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 FAM160A1Q05DH4 1040 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 BRAPQ7Z569 592 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
PNKP-201ENST00000322344 NOLC1Q14978 699 aaKnown RBP eCLIP26.11■■□□□ 1.77
PNKP-201ENST00000322344 ALX1Q15699 326 aa26.11■■□□□ 1.77
PNKP-201ENST00000322344 FBXO18Q8NFZ0 1043 aa26.11■■□□□ 1.77
PNKP-201ENST00000322344 FTOQ9C0B1 505 aaKnown RBP eCLIP26.11■■□□□ 1.77
PNKP-201ENST00000322344 CCDC87Q9NVE4 849 aa26.11■■□□□ 1.77
PNKP-201ENST00000322344 KINO60870 393 aaKnown RBP26.1■■□□□ 1.77
PNKP-201ENST00000322344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.1■■□□□ 1.77
PNKP-201ENST00000322344 MPNDQ8N594 471 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 ANGEL1Q9UNK9 670 aaKnown RBP26.1■■□□□ 1.77
PNKP-201ENST00000322344 THRAP3Q9Y2W1 955 aaKnown RBP26.1■■□□□ 1.77
PNKP-201ENST00000322344 TCRBV5S4A2TA0A5A2 114 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 ME1P48163 572 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 PARP10Q53GL7 1025 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 ENGASEQ8NFI3 743 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 NBPF3Q9H094 633 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 SPTLC3Q9NUV7 552 aa26.1■■□□□ 1.77
PNKP-201ENST00000322344 A0A1W2PQ27 194 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 A0A1W2PQ64 194 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 A0A1W2PQD8 194 aa26.09■■□□□ 1.77
PNKP-201ENST00000322344 SNW1Q13573 536 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms