RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MYO1BO43795 1136 aa22.25■■□□□ 1.15
TPM1-203ENST00000317516 CAVIN4Q5BKX8 364 aa22.25■■□□□ 1.15
TPM1-203ENST00000317516 CERS5Q8N5B7 392 aa22.25■■□□□ 1.15
TPM1-203ENST00000317516 MTMR14Q8NCE2 650 aa22.25■■□□□ 1.15
TPM1-203ENST00000317516 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
TPM1-203ENST00000317516 FAM84BQ96KN1 310 aaPredicted RBP22.25■■□□□ 1.15
TPM1-203ENST00000317516 PSME4Q14997 1843 aa22.24■■□□□ 1.15
TPM1-203ENST00000317516 FAM155AB1AL88 458 aaPredicted RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 F8W031 263 aaPredicted RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 CAPN15O75808 1086 aa22.24■■□□□ 1.15
TPM1-203ENST00000317516 UBTFL1P0CB47 393 aaPredicted RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 GYG1P46976 350 aa22.24■■□□□ 1.15
TPM1-203ENST00000317516 TTLL12Q14166 644 aaPredicted RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 ZBED3Q96IU2 234 aaPredicted RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 SCAF8Q9UPN6 1271 aaKnown RBP22.24■■□□□ 1.15
TPM1-203ENST00000317516 FAM205AQ6ZU69 1335 aa22.24■■□□□ 1.15
TPM1-203ENST00000317516 PDE8BO95263 885 aa22.23■■□□□ 1.15
TPM1-203ENST00000317516 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
TPM1-203ENST00000317516 PRAMEF18Q5VWM3 479 aa22.23■■□□□ 1.15
TPM1-203ENST00000317516 REM2Q8IYK8 340 aaPredicted RBP22.23■■□□□ 1.15
TPM1-203ENST00000317516 FRAT2O75474 233 aaPredicted RBP22.22■■□□□ 1.15
TPM1-203ENST00000317516 SLC10A3P09131 477 aa22.22■■□□□ 1.15
TPM1-203ENST00000317516 RARSP54136 660 aaKnown RBP22.22■■□□□ 1.15
TPM1-203ENST00000317516 KIF23Q02241 960 aaPredicted RBP22.22■■□□□ 1.15
TPM1-203ENST00000317516 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
TPM1-203ENST00000317516 JAG2Q9Y219 1238 aa22.22■■□□□ 1.15
TPM1-203ENST00000317516 POLR2AP24928 1970 aaKnown RBP22.21■■□□□ 1.15
TPM1-203ENST00000317516 THSD7BQ9C0I4 1608 aa22.21■■□□□ 1.15
TPM1-203ENST00000317516 RBM5P52756 815 aaKnown RBP eCLIP22.21■■□□□ 1.15
TPM1-203ENST00000317516 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
TPM1-203ENST00000317516 FBXO33Q7Z6M2 555 aa22.21■■□□□ 1.15
TPM1-203ENST00000317516 ARHGAP45Q92619 1136 aa22.21■■□□□ 1.15
TPM1-203ENST00000317516 ZIC5Q96T25 663 aa22.21■■□□□ 1.15
TPM1-203ENST00000317516 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
TPM1-203ENST00000317516 ARMC9Q7Z3E5 817 aa22.2■■□□□ 1.14
TPM1-203ENST00000317516 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
TPM1-203ENST00000317516 DEFB129Q9H1M3 183 aa22.2■■□□□ 1.14
TPM1-203ENST00000317516 TSKSQ9UJT2 592 aa22.2■■□□□ 1.14
TPM1-203ENST00000317516 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
TPM1-203ENST00000317516 SPDYE2BA6NHP3 402 aa22.19■■□□□ 1.14
TPM1-203ENST00000317516 UBE2Q2LH0YL09 131 aa22.19■■□□□ 1.14
TPM1-203ENST00000317516 EYA2O00167 538 aa22.19■■□□□ 1.14
TPM1-203ENST00000317516 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
TPM1-203ENST00000317516 SPDYE6P0CI01 402 aa22.19■■□□□ 1.14
TPM1-203ENST00000317516 PUM3Q15397 648 aaKnown RBP22.19■■□□□ 1.14
TPM1-203ENST00000317516 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
TPM1-203ENST00000317516 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
TPM1-203ENST00000317516 MOB2Q70IA6 237 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 RASAL3Q86YV0 1011 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 TBC1D22AQ8WUA7 517 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 PRMT6Q96LA8 375 aaPredicted RBP22.18■■□□□ 1.14
TPM1-203ENST00000317516 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 SERPINA10Q9UK55 444 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
TPM1-203ENST00000317516 TTF2Q9UNY4 1162 aaKnown RBP22.18■■□□□ 1.14
TPM1-203ENST00000317516 RFX5P48382 616 aaPredicted RBP22.17■■□□□ 1.14
TPM1-203ENST00000317516 PTPN12Q05209 780 aaKnown RBP22.17■■□□□ 1.14
TPM1-203ENST00000317516 SUPT20HL1Q3ZLR7 823 aa22.16■■□□□ 1.14
TPM1-203ENST00000317516 CSRNP1Q96S65 589 aa22.16■■□□□ 1.14
TPM1-203ENST00000317516 VEZTQ9HBM0 779 aa22.16■■□□□ 1.14
TPM1-203ENST00000317516 CLRN2A0PK11 232 aa22.15■■□□□ 1.14
TPM1-203ENST00000317516 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
TPM1-203ENST00000317516 SLC5A1P13866 664 aa22.15■■□□□ 1.14
TPM1-203ENST00000317516 CHAF1AQ13111 956 aaPredicted RBP22.15■■□□□ 1.14
TPM1-203ENST00000317516 LPIN2Q92539 896 aa22.15■■□□□ 1.14
TPM1-203ENST00000317516 IQSEC3Q9UPP2 1182 aaPredicted RBP22.15■■□□□ 1.14
TPM1-203ENST00000317516 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
TPM1-203ENST00000317516 CIAO1O76071 339 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 GNAI3P08754 354 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 FGFR2P21802 821 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 BCAMP50895 628 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 TNFAIP1Q13829 316 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 PRKG1Q13976 671 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
TPM1-203ENST00000317516 MIER1Q8N108 512 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 RNF186Q9NXI6 227 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 PAPPA2Q9BXP8 1791 aa22.14■■□□□ 1.13
TPM1-203ENST00000317516 TRPA1O75762 1119 aa22.13■■□□□ 1.13
TPM1-203ENST00000317516 HDLBPQ00341 1268 aaKnown RBP22.13■■□□□ 1.13
TPM1-203ENST00000317516 ANGEL1Q9UNK9 670 aaKnown RBP22.13■■□□□ 1.13
TPM1-203ENST00000317516 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
TPM1-203ENST00000317516 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
TPM1-203ENST00000317516 SIL1Q9H173 461 aa22.12■■□□□ 1.13
TPM1-203ENST00000317516 SUGT1Q9Y2Z0 365 aa22.12■■□□□ 1.13
TPM1-203ENST00000317516 UNCXA6NJT0 531 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 IL15P40933 162 aaPredicted RBP22.11■■□□□ 1.13
TPM1-203ENST00000317516 CRKP46108 304 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
TPM1-203ENST00000317516 RASA3Q14644 834 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 LDLRAD1Q5T700 205 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 ATG9AQ7Z3C6 839 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
TPM1-203ENST00000317516 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 MEIS3Q99687 375 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 MRIQ9BWK5 157 aa22.11■■□□□ 1.13
TPM1-203ENST00000317516 ZNF70Q9UC06 446 aaPredicted RBP22.11■■□□□ 1.13
TPM1-203ENST00000317516 ZNF646O15015 1829 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms