RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 IL6STP40189 918 aaPredicted RBP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 PLCB2Q00722 1185 aa23.24■■□□□ 1.31
LRFN4-201ENST00000309602 RBM43Q6ZSC3 357 aaKnown RBP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 FTOQ9C0B1 505 aaKnown RBP eCLIP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 COL16A1Q07092 1604 aaPredicted RBP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 PDE8BO95263 885 aa23.24■■□□□ 1.31
LRFN4-201ENST00000309602 ADD2P35612 726 aa23.24■■□□□ 1.31
LRFN4-201ENST00000309602 ZNF512BQ96KM6 892 aaPredicted RBP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.31
LRFN4-201ENST00000309602 CARMIL3Q8ND23 1372 aa23.24■■□□□ 1.31
LRFN4-201ENST00000309602 PRC1O43663 620 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 FDPSP14324 419 aaKnown RBP23.23■■□□□ 1.31
LRFN4-201ENST00000309602 GUCY1B3Q02153 619 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 ZNF34Q8IZ26 560 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 FAM200AQ8TCP9 573 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 ZNF830Q96NB3 372 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-201ENST00000309602 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
LRFN4-201ENST00000309602 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 MYH15Q9Y2K3 1946 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 ANTXR2P58335 489 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 SLIT2O94813 1529 aa23.23■■□□□ 1.31
LRFN4-201ENST00000309602 PHKA1P46020 1223 aa23.22■■□□□ 1.31
LRFN4-201ENST00000309602 SLC9C2Q5TAH2 1124 aa23.22■■□□□ 1.31
LRFN4-201ENST00000309602 RCOR1Q9UKL0 485 aa23.22■■□□□ 1.31
LRFN4-201ENST00000309602 ZNF213O14771 459 aa23.21■■□□□ 1.31
LRFN4-201ENST00000309602 CCDC102BQ68D86 513 aa23.21■■□□□ 1.31
LRFN4-201ENST00000309602 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
LRFN4-201ENST00000309602 USP28Q96RU2 1077 aa23.21■■□□□ 1.31
LRFN4-201ENST00000309602 ZSCAN25Q6NSZ9 544 aa23.21■■□□□ 1.31
LRFN4-201ENST00000309602 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
LRFN4-201ENST00000309602 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.31
LRFN4-201ENST00000309602 KLF18A0A0U1RQI7 1052 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 TTF1Q15361 905 aaPredicted RBP23.2■■□□□ 1.3
LRFN4-201ENST00000309602 HELBQ8NG08 1087 aaPredicted RBP23.2■■□□□ 1.3
LRFN4-201ENST00000309602 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 HPS5Q9UPZ3 1129 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 IDH1O75874 414 aaKnown RBP23.2■■□□□ 1.3
LRFN4-201ENST00000309602 ARID4AP29374 1257 aaPredicted RBP23.2■■□□□ 1.3
LRFN4-201ENST00000309602 KIAA2012Q0VF49 1180 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 ANO6Q4KMQ2 910 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 NBPF3Q9H094 633 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 ATRNO75882 1429 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 WNK3Q9BYP7 1800 aa23.2■■□□□ 1.3
LRFN4-201ENST00000309602 LRP5O75197 1615 aa23.19■■□□□ 1.3
LRFN4-201ENST00000309602 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
LRFN4-201ENST00000309602 RALYLQ86SE5 291 aaKnown RBP23.19■■□□□ 1.3
LRFN4-201ENST00000309602 LUZP1Q86V48 1076 aa23.19■■□□□ 1.3
LRFN4-201ENST00000309602 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
LRFN4-201ENST00000309602 MYO5AQ9Y4I1 1855 aaKnown RBP23.19■■□□□ 1.3
LRFN4-201ENST00000309602 R3HCC1Q9Y3T6 440 aaKnown RBP23.19■■□□□ 1.3
LRFN4-201ENST00000309602 GOLGA8BA8MQT2 603 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 TPM2P07951 284 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 EIF5P55010 431 aaKnown RBP23.18■■□□□ 1.3
LRFN4-201ENST00000309602 PIP4K2BP78356 416 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 UBE3CQ15386 1083 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 RAB11FIP4Q86YS3 637 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 ZNF396Q96N95 335 aaPredicted RBP23.18■■□□□ 1.3
LRFN4-201ENST00000309602 CBX8Q9HC52 389 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 DENND2AQ9ULE3 1009 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
LRFN4-201ENST00000309602 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 FGFR2P21802 821 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 PUM3Q15397 648 aaKnown RBP23.18■■□□□ 1.3
LRFN4-201ENST00000309602 SUSD4Q5VX71 490 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 WWC3Q9ULE0 1092 aa23.18■■□□□ 1.3
LRFN4-201ENST00000309602 COL22A1Q8NFW1 1626 aaPredicted RBP23.17■■□□□ 1.3
LRFN4-201ENST00000309602 PDE6AP16499 860 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 ATL3Q6DD88 541 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 INTS5Q6P9B9 1019 aaKnown RBP23.17■■□□□ 1.3
LRFN4-201ENST00000309602 LPIN2Q92539 896 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 OTUD7BQ6GQQ9 843 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 TBC1D10CQ8IV04 446 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 CCAR1Q8IX12 1150 aaKnown RBP23.17■■□□□ 1.3
LRFN4-201ENST00000309602 NKX2-3Q8TAU0 364 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 GOLPH3LQ9H4A5 285 aa23.17■■□□□ 1.3
LRFN4-201ENST00000309602 MROH5Q6ZUA9 1318 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 A0A0G2JS52 829 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 UQCRFS1P1P0C7P4 283 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 WDR19Q8NEZ3 1342 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 SASS6Q6UVJ0 657 aa23.16■■□□□ 1.3
LRFN4-201ENST00000309602 TCRBV5S4A2TA0A5A2 114 aa23.15■■□□□ 1.3
LRFN4-201ENST00000309602 SNAP23O00161 211 aa23.15■■□□□ 1.3
LRFN4-201ENST00000309602 CCDC87Q9NVE4 849 aa23.15■■□□□ 1.3
LRFN4-201ENST00000309602 AK7Q96M32 723 aa23.14■■□□□ 1.3
LRFN4-201ENST00000309602 ORC3Q9UBD5 711 aaPredicted RBP23.14■■□□□ 1.3
LRFN4-201ENST00000309602 DHX16O60231 1041 aaKnown RBP23.14■■□□□ 1.29
LRFN4-201ENST00000309602 APPP05067 770 aa23.14■■□□□ 1.29
LRFN4-201ENST00000309602 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
LRFN4-201ENST00000309602 TERF1P54274 439 aa23.14■■□□□ 1.29
LRFN4-201ENST00000309602 ACSBG1Q96GR2 724 aa23.14■■□□□ 1.29
LRFN4-201ENST00000309602 AHDC1Q5TGY3 1603 aaPredicted RBP23.14■■□□□ 1.29
LRFN4-201ENST00000309602 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 PIBF1Q8WXW3 757 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 C8orf76Q96K31 380 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 DNAJC25Q9H1X3 360 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 SEC31BQ9NQW1 1179 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 ARAP2Q8WZ64 1704 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 TRDNQ13061 729 aa23.13■■□□□ 1.29
LRFN4-201ENST00000309602 SNW1Q13573 536 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms