RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 TACC1O75410 805 aa21.99■■□□□ 1.11
USP48-201ENST00000308271 UQCRFS1P1P0C7P4 283 aa21.99■■□□□ 1.11
USP48-201ENST00000308271 DHX58Q96C10 678 aa21.99■■□□□ 1.11
USP48-201ENST00000308271 PRDM11Q9NQV5 511 aa21.99■■□□□ 1.11
USP48-201ENST00000308271 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
USP48-201ENST00000308271 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
USP48-201ENST00000308271 ENOX2Q16206 610 aaKnown RBP21.98■■□□□ 1.11
USP48-201ENST00000308271 PLCD4Q9BRC7 762 aa21.98■■□□□ 1.11
USP48-201ENST00000308271 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
USP48-201ENST00000308271 SPECC1Q5M775 1068 aa21.98■■□□□ 1.11
USP48-201ENST00000308271 BCCIPQ9P287 314 aaKnown RBP eCLIP21.98■■□□□ 1.11
USP48-201ENST00000308271 OAS2P29728 719 aaKnown RBP21.98■■□□□ 1.11
USP48-201ENST00000308271 ETF1P62495 437 aaKnown RBP21.98■■□□□ 1.11
USP48-201ENST00000308271 WDHD1O75717 1129 aaPredicted RBP21.97■■□□□ 1.11
USP48-201ENST00000308271 DYDC1Q8WWB3 177 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 IKQ13123 557 aaPredicted RBP21.97■■□□□ 1.11
USP48-201ENST00000308271 TPCN1Q9ULQ1 816 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 GUCA1BQ9UMX6 200 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 CDC25BP30305 580 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 KIF5AQ12840 1032 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 CCDC96Q2M329 555 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 GPR161Q8N6U8 529 aaKnown RBP21.97■■□□□ 1.11
USP48-201ENST00000308271 DDX21Q9NR30 783 aaKnown RBP eCLIP21.97■■□□□ 1.11
USP48-201ENST00000308271 MYOM2P54296 1465 aa21.97■■□□□ 1.11
USP48-201ENST00000308271 PSMA7O14818 248 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 MAP2K1Q02750 393 aaPredicted RBP21.96■■□□□ 1.11
USP48-201ENST00000308271 PTH1RQ03431 593 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 TMEM87AQ8NBN3 555 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 LSG1Q9H089 658 aaKnown RBP21.96■■□□□ 1.11
USP48-201ENST00000308271 TTF2Q9UNY4 1162 aaKnown RBP21.96■■□□□ 1.11
USP48-201ENST00000308271 ASXL2Q76L83 1435 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 STX17P56962 302 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 SEPT11Q9NVA2 429 aaKnown RBP21.96■■□□□ 1.11
USP48-201ENST00000308271 TRPM1Q7Z4N2 1603 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 IBSPP21815 317 aaPredicted RBP21.96■■□□□ 1.11
USP48-201ENST00000308271 ADALQ6DHV7 355 aa21.96■■□□□ 1.11
USP48-201ENST00000308271 KIF5BP33176 963 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 FAM76AQ8TAV0 307 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 NCOA5Q9HCD5 579 aaKnown RBP21.95■■□□□ 1.1
USP48-201ENST00000308271 KIAA1468Q9P260 1216 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 KCNH3Q9ULD8 1083 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 TRPM2O94759 1503 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 ZNF853P0CG23 659 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 NEFHP12036 1026 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 ATP2B3Q16720 1220 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 MLKLQ8NB16 471 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 NAPGQ99747 312 aaPredicted RBP21.95■■□□□ 1.1
USP48-201ENST00000308271 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 NCKAP5LQ9HCH0 1330 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 SMC1AQ14683 1233 aaKnown RBP21.95■■□□□ 1.1
USP48-201ENST00000308271 SEPT7Q16181 437 aaKnown RBP21.95■■□□□ 1.1
USP48-201ENST00000308271 TMEM266Q2M3C6 531 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 CCDC129Q6ZRS4 1044 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 RASEFQ8IZ41 740 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 IGSF22Q8N9C0 903 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 ZNF287Q9HBT7 754 aa21.95■■□□□ 1.1
USP48-201ENST00000308271 TRMT112Q9UI30 125 aaKnown RBP21.95■■□□□ 1.1
USP48-201ENST00000308271 PSDA5PKW4 1024 aaPredicted RBP21.94■■□□□ 1.1
USP48-201ENST00000308271 INCENPQ9NQS7 918 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 SEC63Q9UGP8 760 aaKnown RBP21.94■■□□□ 1.1
USP48-201ENST00000308271 SBNO1A3KN83 1393 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 SLC9C2Q5TAH2 1124 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 CALML4Q96GE6 196 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.94■■□□□ 1.1
USP48-201ENST00000308271 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
USP48-201ENST00000308271 PPP1R12BO60237 982 aaPredicted RBP21.94■■□□□ 1.1
USP48-201ENST00000308271 LUC7L2Q9Y383 392 aaKnown RBP21.94■■□□□ 1.1
USP48-201ENST00000308271 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 OTUD6BQ8N6M0 293 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 NRBP1Q9UHY1 535 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 CTDP1Q9Y5B0 961 aaPredicted RBP21.93■■□□□ 1.1
USP48-201ENST00000308271 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 ZSCAN26Q16670 478 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 EFCAB8A8MWE9 144 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 CUTAO60888 179 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 STAT6P42226 847 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 AFAP1L1Q8TED9 768 aa21.93■■□□□ 1.1
USP48-201ENST00000308271 CCDC113Q9H0I3 377 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 RILPL1Q5EBL4 403 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 CACTINQ8WUQ7 758 aaKnown RBP21.92■■□□□ 1.1
USP48-201ENST00000308271 HOXC9P31274 260 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 BRD3Q15059 726 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 KBTBD3Q8NAB2 608 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 ESR2Q92731 530 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 MKNK2Q9HBH9 465 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 GCOM1H8Y6P7 765 aaPredicted RBP21.92■■□□□ 1.1
USP48-201ENST00000308271 MYZAPP0CAP1 466 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 ATRIPQ8WXE1 791 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 EXOC1Q9NV70 894 aa21.92■■□□□ 1.1
USP48-201ENST00000308271 CCDC40Q4G0X9 1142 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 CCDC42Q96M95 316 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 UBXN1Q04323 297 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 DHX37Q8IY37 1157 aaKnown RBP21.91■■□□□ 1.1
USP48-201ENST00000308271 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 IDEP14735 1019 aa21.91■■□□□ 1.1
USP48-201ENST00000308271 TRIM14Q14142 442 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms