RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TPM4P67936 248 aa18.84■□□□□ 0.61
CCDC8-201ENST00000307522 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
CCDC8-201ENST00000307522 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
CCDC8-201ENST00000307522 ORC3Q9UBD5 711 aaPredicted RBP18.84■□□□□ 0.61
CCDC8-201ENST00000307522 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
CCDC8-201ENST00000307522 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
CCDC8-201ENST00000307522 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
CCDC8-201ENST00000307522 SEC62Q99442 399 aaKnown RBP18.84■□□□□ 0.61
CCDC8-201ENST00000307522 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.61
CCDC8-201ENST00000307522 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 LRRC24Q50LG9 513 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 WWC2Q6AWC2 1192 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 DBNDD2Q9BQY9 259 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 FSD1Q9BTV5 496 aa18.83■□□□□ 0.61
CCDC8-201ENST00000307522 EVCP57679 992 aa18.83■□□□□ 0.6
CCDC8-201ENST00000307522 GUCY1B3Q02153 619 aa18.83■□□□□ 0.6
CCDC8-201ENST00000307522 ALDH1L1O75891 902 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 PACS2Q86VP3 889 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 DDX19AQ9NUU7 478 aaKnown RBP18.82■□□□□ 0.6
CCDC8-201ENST00000307522 IFNKQ9P0W0 207 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
CCDC8-201ENST00000307522 ZRANB2O95218 330 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC8-201ENST00000307522 TBC1D8O95759 1140 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 MCM6Q14566 821 aa18.82■□□□□ 0.6
CCDC8-201ENST00000307522 H3BQF6 201 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 SNAP23O00161 211 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 REXO1L1PQ8IX06 675 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 HLFQ16534 295 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 ARGLU1Q9NWB6 273 aaPredicted RBP18.81■□□□□ 0.6
CCDC8-201ENST00000307522 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 NBPF11Q86T75 865 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 SRLQ86TD4 932 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 DHX40Q8IX18 779 aaKnown RBP18.81■□□□□ 0.6
CCDC8-201ENST00000307522 XPO4Q9C0E2 1151 aaKnown RBP18.81■□□□□ 0.6
CCDC8-201ENST00000307522 GOLPH3LQ9H4A5 285 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 ADAM21Q9UKJ8 722 aa18.81■□□□□ 0.6
CCDC8-201ENST00000307522 APPP05067 770 aa18.8■□□□□ 0.6
CCDC8-201ENST00000307522 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
CCDC8-201ENST00000307522 VPS18Q9P253 973 aa18.8■□□□□ 0.6
CCDC8-201ENST00000307522 ICE2Q659A1 982 aa18.8■□□□□ 0.6
CCDC8-201ENST00000307522 SUGCTQ9HAC7 445 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 N4BP1O75113 896 aaKnown RBP18.79■□□□□ 0.6
CCDC8-201ENST00000307522 GPS2Q13227 327 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 CCAR1Q8IX12 1150 aaKnown RBP18.79■□□□□ 0.6
CCDC8-201ENST00000307522 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 CCDC24Q8N4L8 307 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
CCDC8-201ENST00000307522 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 SCAND2PQ9GZW5 306 aaPredicted RBP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 DBNLQ9UJU6 430 aaKnown RBP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 KCNQ2O43526 872 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 SFPQP23246 707 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC8-201ENST00000307522 MRFAP1L1Q96HT8 127 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 L2HGDHQ9H9P8 463 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 H3BQV1 296 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 BRF1Q92994 677 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 RABEP2Q9H5N1 569 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
CCDC8-201ENST00000307522 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
CCDC8-201ENST00000307522 LMOD1P29536 600 aaPredicted RBP18.77■□□□□ 0.6
CCDC8-201ENST00000307522 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
CCDC8-201ENST00000307522 TTLL5Q6EMB2 1281 aa18.77■□□□□ 0.6
CCDC8-201ENST00000307522 PTF1AQ7RTS3 328 aa18.77■□□□□ 0.6
CCDC8-201ENST00000307522 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
CCDC8-201ENST00000307522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC8-201ENST00000307522 JRKLQ9Y4A0 524 aa18.77■□□□□ 0.6
CCDC8-201ENST00000307522 EXOC5O00471 708 aa18.77■□□□□ 0.59
CCDC8-201ENST00000307522 PI16Q6UXB8 463 aa18.77■□□□□ 0.59
CCDC8-201ENST00000307522 UTP14AQ9BVJ6 771 aaKnown RBP18.77■□□□□ 0.59
CCDC8-201ENST00000307522 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 TFRCP02786 760 aaKnown RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 CC2D1AQ6P1N0 951 aaPredicted RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 ZNF589Q86UQ0 364 aaPredicted RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 STX1AQ16623 288 aa18.76■□□□□ 0.59
CCDC8-201ENST00000307522 PLBD2Q8NHP8 589 aa18.76■□□□□ 0.59
CCDC8-201ENST00000307522 C8orf37Q96NL8 207 aa18.76■□□□□ 0.59
CCDC8-201ENST00000307522 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
CCDC8-201ENST00000307522 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC8-201ENST00000307522 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
CCDC8-201ENST00000307522 ALS2Q96Q42 1657 aa18.75■□□□□ 0.59
CCDC8-201ENST00000307522 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
CCDC8-201ENST00000307522 HSP90AB4PQ58FF6 505 aa18.75■□□□□ 0.59
CCDC8-201ENST00000307522 VPS53Q5VIR6 699 aa18.75■□□□□ 0.59
CCDC8-201ENST00000307522 PDE11AQ9HCR9 933 aa18.75■□□□□ 0.59
CCDC8-201ENST00000307522 GOLIM4O00461 696 aa18.74■□□□□ 0.59
CCDC8-201ENST00000307522 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms