RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 LEMD3Q9Y2U8 911 aa15.32■□□□□ 0.04
SMIM4-201ENST00000307106 ZNF804BA4D1E1 1349 aa15.32■□□□□ 0.04
SMIM4-201ENST00000307106 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 MYO1BO43795 1136 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
SMIM4-201ENST00000307106 KLRK1P26718 216 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 TAF1CQ15572 869 aaPredicted RBP15.31■□□□□ 0.04
SMIM4-201ENST00000307106 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 SH3TC2Q8TF17 1288 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 DPF3Q92784 378 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 OPTNQ96CV9 577 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 GREM2Q9H772 168 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 ZFYVE28Q9HCC9 887 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 PCDHAC2Q9Y5I4 1007 aa15.31■□□□□ 0.04
SMIM4-201ENST00000307106 TTLL11Q8NHH1 800 aa15.3■□□□□ 0.04
SMIM4-201ENST00000307106 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
SMIM4-201ENST00000307106 ELP3Q9H9T3 547 aa15.3■□□□□ 0.04
SMIM4-201ENST00000307106 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SMIM4-201ENST00000307106 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
SMIM4-201ENST00000307106 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
SMIM4-201ENST00000307106 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
SMIM4-201ENST00000307106 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
SMIM4-201ENST00000307106 CFAP100Q494V2 611 aa15.28■□□□□ 0.04
SMIM4-201ENST00000307106 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
SMIM4-201ENST00000307106 BRI3BPQ8WY22 251 aa15.28■□□□□ 0.04
SMIM4-201ENST00000307106 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
SMIM4-201ENST00000307106 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
SMIM4-201ENST00000307106 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
SMIM4-201ENST00000307106 RASA3Q14644 834 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 CCL15Q16663 113 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 SHISA4Q96DD7 197 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
SMIM4-201ENST00000307106 AOX1Q06278 1338 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 KCNJ4P48050 445 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 KIF22Q14807 665 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 ARHGAP39Q9C0H5 1083 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 PRO3102Q9H379 93 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
SMIM4-201ENST00000307106 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
SMIM4-201ENST00000307106 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
SMIM4-201ENST00000307106 GTF2A2P52657 109 aa15.25■□□□□ 0.03
SMIM4-201ENST00000307106 LACTBP83111 547 aaPredicted RBP15.25■□□□□ 0.03
SMIM4-201ENST00000307106 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
SMIM4-201ENST00000307106 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
SMIM4-201ENST00000307106 CACNA1FO60840 1977 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 GNRH1P01148 92 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 RBM5P52756 815 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMIM4-201ENST00000307106 MTFR1Q15390 333 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
SMIM4-201ENST00000307106 MPHOSPH8Q99549 860 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 HTATIP2Q9BUP3 242 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 CUL9Q8IWT3 2517 aa15.24■□□□□ 0.03
SMIM4-201ENST00000307106 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
SMIM4-201ENST00000307106 TLR2O60603 784 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 IGKV5-2P06315 115 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 ITGA6P23229 1130 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 PRMT2P55345 433 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 TNFAIP1Q13829 316 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 VGLL4Q14135 290 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 LAMA3Q16787 3333 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 A0A0C4DFX4 3053 aa15.23■□□□□ 0.03
SMIM4-201ENST00000307106 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
SMIM4-201ENST00000307106 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
SMIM4-201ENST00000307106 FKBP1AP62942 108 aaKnown RBP15.22■□□□□ 0.03
SMIM4-201ENST00000307106 CHRNDQ07001 517 aa15.22■□□□□ 0.03
SMIM4-201ENST00000307106 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
SMIM4-201ENST00000307106 NR2E3Q9Y5X4 410 aa15.22■□□□□ 0.03
SMIM4-201ENST00000307106 CSADQ9Y600 493 aa15.22■□□□□ 0.03
SMIM4-201ENST00000307106 IRS2Q9Y4H2 1338 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 A0A1W2PPC1 479 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 GJA8P48165 433 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMIM4-201ENST00000307106 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
SMIM4-201ENST00000307106 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
SMIM4-201ENST00000307106 SNAP23O00161 211 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 SOX1O00570 391 aaPredicted RBP15.2■□□□□ 0.02
SMIM4-201ENST00000307106 ZBTB7BO15156 539 aaPredicted RBP15.2■□□□□ 0.02
SMIM4-201ENST00000307106 IL1R1P14778 569 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
SMIM4-201ENST00000307106 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 UBE3BQ7Z3V4 1068 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 LRCH3Q96II8 777 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 TEPSINQ96N21 525 aa15.2■□□□□ 0.02
SMIM4-201ENST00000307106 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
SMIM4-201ENST00000307106 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
SMIM4-201ENST00000307106 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
SMIM4-201ENST00000307106 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
SMIM4-201ENST00000307106 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms