RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZBED3Q96IU2 234 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC1-201ENST00000303731 SMC4Q9NTJ3 1288 aa20.95■□□□□ 0.94
TRAPPC1-201ENST00000303731 SAGE1Q9NXZ1 904 aa20.95■□□□□ 0.94
TRAPPC1-201ENST00000303731 DLGAP5Q15398 846 aa20.94■□□□□ 0.94
TRAPPC1-201ENST00000303731 AKAP11Q9UKA4 1901 aa20.94■□□□□ 0.94
TRAPPC1-201ENST00000303731 MYO1BO43795 1136 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 CERS5Q8N5B7 392 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 USP44Q9H0E7 712 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 RIPOR2Q9Y4F9 1068 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 FAM205AQ6ZU69 1335 aa20.93■□□□□ 0.94
TRAPPC1-201ENST00000303731 HIBADHP31937 336 aaKnown RBP20.92■□□□□ 0.94
TRAPPC1-201ENST00000303731 KIF23Q02241 960 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC1-201ENST00000303731 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
TRAPPC1-201ENST00000303731 PPP2R3BQ9Y5P8 575 aa20.92■□□□□ 0.94
TRAPPC1-201ENST00000303731 RASAL3Q86YV0 1011 aa20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 ARAP2Q8WZ64 1704 aa20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 ZIC5Q96T25 663 aa20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 PUS3Q9BZE2 481 aaKnown RBP20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 HDAC5Q9UQL6 1122 aa20.91■□□□□ 0.94
TRAPPC1-201ENST00000303731 TTLL12Q14166 644 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC1-201ENST00000303731 METTL24Q5JXM2 366 aa20.9■□□□□ 0.94
TRAPPC1-201ENST00000303731 ARMC9Q7Z3E5 817 aa20.9■□□□□ 0.94
TRAPPC1-201ENST00000303731 TSKSQ9UJT2 592 aa20.9■□□□□ 0.94
TRAPPC1-201ENST00000303731 SPDYE2BA6NHP3 402 aa20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 SPDYE6P0CI01 402 aa20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 CAVIN4Q5BKX8 364 aa20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 VPS37DQ86XT2 251 aa20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 FAM84BQ96KN1 310 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 API5Q9BZZ5 524 aaKnown RBP20.89■□□□□ 0.93
TRAPPC1-201ENST00000303731 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 PDE8BO95263 885 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 GYG1P46976 350 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 CFAP100Q494V2 611 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 MFSD14BQ5SR56 506 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 DEFB129Q9H1M3 183 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 SCAF8Q9UPN6 1271 aaKnown RBP20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 CASP8AP2Q9UKL3 1982 aa20.88■□□□□ 0.93
TRAPPC1-201ENST00000303731 F8W031 263 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC1-201ENST00000303731 PRAMEF18Q5VWM3 479 aa20.87■□□□□ 0.93
TRAPPC1-201ENST00000303731 ABHD8Q96I13 439 aa20.87■□□□□ 0.93
TRAPPC1-201ENST00000303731 CSRNP1Q96S65 589 aa20.87■□□□□ 0.93
TRAPPC1-201ENST00000303731 SERPINA10Q9UK55 444 aa20.87■□□□□ 0.93
TRAPPC1-201ENST00000303731 UBE2Q2LH0YL09 131 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 UBTFL1P0CB47 393 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 LRRC24Q50LG9 513 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 FBXO33Q7Z6M2 555 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 VGLL2Q8N8G2 317 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 TBC1D22AQ8WUA7 517 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 RNF186Q9NXI6 227 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 FBXO3Q9UK99 471 aa20.86■□□□□ 0.93
TRAPPC1-201ENST00000303731 UNCXA6NJT0 531 aa20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 RBM5P52756 815 aaKnown RBP eCLIP20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 TNFAIP1Q13829 316 aa20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 PUM3Q15397 648 aaKnown RBP20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 SUPT20HL1Q3ZLR7 823 aa20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 MOB2Q70IA6 237 aa20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 NOB1Q9ULX3 412 aaKnown RBP20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 JAG2Q9Y219 1238 aa20.85■□□□□ 0.93
TRAPPC1-201ENST00000303731 PPP1R12BO60237 982 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 FRAT2O75474 233 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 IFIT1P09914 478 aaKnown RBP20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 PRMT6Q96LA8 375 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 TTF2Q9UNY4 1162 aaKnown RBP20.84■□□□□ 0.93
TRAPPC1-201ENST00000303731 EYA2O00167 538 aa20.83■□□□□ 0.93
TRAPPC1-201ENST00000303731 TRPA1O75762 1119 aa20.83■□□□□ 0.93
TRAPPC1-201ENST00000303731 MAP3K11Q16584 847 aa20.83■□□□□ 0.93
TRAPPC1-201ENST00000303731 RFX5P48382 616 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 HDLBPQ00341 1268 aaKnown RBP20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 SREBF2Q12772 1141 aa20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 LDLRAD1Q5T700 205 aa20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 KLHDC4Q8TBB5 520 aa20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 VEZTQ9HBM0 779 aa20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 ANGEL1Q9UNK9 670 aaKnown RBP20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 SUGT1Q9Y2Z0 365 aa20.82■□□□□ 0.92
TRAPPC1-201ENST00000303731 CLRN2A0PK11 232 aa20.81■□□□□ 0.92
TRAPPC1-201ENST00000303731 FGFR2P21802 821 aa20.81■□□□□ 0.92
TRAPPC1-201ENST00000303731 PTPN12Q05209 780 aaKnown RBP20.81■□□□□ 0.92
TRAPPC1-201ENST00000303731 SPDYE2Q495Y8 402 aa20.81■□□□□ 0.92
TRAPPC1-201ENST00000303731 LPIN2Q92539 896 aa20.81■□□□□ 0.92
TRAPPC1-201ENST00000303731 MAST3O60307 1309 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 CIAO1O76071 339 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 SLC5A1P13866 664 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 TM4SF4P48230 202 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 PCDHAC2Q9Y5I4 1007 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 MYH13Q9UKX3 1938 aa20.8■□□□□ 0.92
TRAPPC1-201ENST00000303731 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
TRAPPC1-201ENST00000303731 CRKP46108 304 aa20.79■□□□□ 0.92
TRAPPC1-201ENST00000303731 PRKG1Q13976 671 aa20.79■□□□□ 0.92
TRAPPC1-201ENST00000303731 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
TRAPPC1-201ENST00000303731 MCOLN1Q9GZU1 580 aa20.79■□□□□ 0.92
TRAPPC1-201ENST00000303731 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 ZBTB48P10074 688 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 IREB2P48200 963 aaKnown RBP20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 TNNI2P48788 182 aa20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 BCAMP50895 628 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms