RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 FAM84BQ96KN1 310 aaPredicted RBP22.89■■□□□ 1.25
TMEM88-201ENST00000301599 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.25
TMEM88-201ENST00000301599 SCAF8Q9UPN6 1271 aaKnown RBP22.89■■□□□ 1.25
TMEM88-201ENST00000301599 GYG1P46976 350 aa22.88■■□□□ 1.25
TMEM88-201ENST00000301599 LRRC24Q50LG9 513 aa22.88■■□□□ 1.25
TMEM88-201ENST00000301599 APOBEC3FQ8IUX4 373 aaKnown RBP22.88■■□□□ 1.25
TMEM88-201ENST00000301599 MTMR14Q8NCE2 650 aa22.88■■□□□ 1.25
TMEM88-201ENST00000301599 ZIC5Q96T25 663 aa22.88■■□□□ 1.25
TMEM88-201ENST00000301599 CAPN15O75808 1086 aa22.87■■□□□ 1.25
TMEM88-201ENST00000301599 NF2P35240 595 aa22.87■■□□□ 1.25
TMEM88-201ENST00000301599 METTL24Q5JXM2 366 aa22.87■■□□□ 1.25
TMEM88-201ENST00000301599 PRAMEF18Q5VWM3 479 aa22.87■■□□□ 1.25
TMEM88-201ENST00000301599 HDAC5Q9UQL6 1122 aa22.87■■□□□ 1.25
TMEM88-201ENST00000301599 THSD7BQ9C0I4 1608 aa22.86■■□□□ 1.25
TMEM88-201ENST00000301599 FAM205AQ6ZU69 1335 aa22.86■■□□□ 1.25
TMEM88-201ENST00000301599 F8W031 263 aaPredicted RBP22.86■■□□□ 1.25
TMEM88-201ENST00000301599 PDE8BO95263 885 aa22.86■■□□□ 1.25
TMEM88-201ENST00000301599 KIF23Q02241 960 aaPredicted RBP22.86■■□□□ 1.25
TMEM88-201ENST00000301599 RARSP54136 660 aaKnown RBP22.85■■□□□ 1.25
TMEM88-201ENST00000301599 TTLL12Q14166 644 aaPredicted RBP22.85■■□□□ 1.25
TMEM88-201ENST00000301599 CAVIN4Q5BKX8 364 aa22.85■■□□□ 1.25
TMEM88-201ENST00000301599 FBXO33Q7Z6M2 555 aa22.85■■□□□ 1.25
TMEM88-201ENST00000301599 VPS37DQ86XT2 251 aa22.85■■□□□ 1.25
TMEM88-201ENST00000301599 JAG2Q9Y219 1238 aa22.85■■□□□ 1.25
TMEM88-201ENST00000301599 MYO1BO43795 1136 aa22.84■■□□□ 1.25
TMEM88-201ENST00000301599 SLC10A3P09131 477 aa22.84■■□□□ 1.25
TMEM88-201ENST00000301599 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
TMEM88-201ENST00000301599 CFAP100Q494V2 611 aa22.84■■□□□ 1.25
TMEM88-201ENST00000301599 KLHDC4Q8TBB5 520 aa22.84■■□□□ 1.25
TMEM88-201ENST00000301599 TSKSQ9UJT2 592 aa22.84■■□□□ 1.25
TMEM88-201ENST00000301599 ZNF646O15015 1829 aaPredicted RBP22.83■■□□□ 1.25
TMEM88-201ENST00000301599 UBE2Q2LH0YL09 131 aa22.83■■□□□ 1.25
TMEM88-201ENST00000301599 REM2Q8IYK8 340 aaPredicted RBP22.83■■□□□ 1.25
TMEM88-201ENST00000301599 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.25
TMEM88-201ENST00000301599 EYA2O00167 538 aa22.82■■□□□ 1.24
TMEM88-201ENST00000301599 RBM5P52756 815 aaKnown RBP eCLIP22.82■■□□□ 1.24
TMEM88-201ENST00000301599 MFSD14BQ5SR56 506 aa22.82■■□□□ 1.24
TMEM88-201ENST00000301599 MOB2Q70IA6 237 aa22.82■■□□□ 1.24
TMEM88-201ENST00000301599 VGLL2Q8N8G2 317 aa22.82■■□□□ 1.24
TMEM88-201ENST00000301599 PRMT6Q96LA8 375 aaPredicted RBP22.82■■□□□ 1.24
TMEM88-201ENST00000301599 DEFB129Q9H1M3 183 aa22.82■■□□□ 1.24
TMEM88-201ENST00000301599 SPDYE2BA6NHP3 402 aa22.81■■□□□ 1.24
TMEM88-201ENST00000301599 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
TMEM88-201ENST00000301599 SPDYE6P0CI01 402 aa22.81■■□□□ 1.24
TMEM88-201ENST00000301599 RFX5P48382 616 aaPredicted RBP22.81■■□□□ 1.24
TMEM88-201ENST00000301599 ARMC9Q7Z3E5 817 aa22.81■■□□□ 1.24
TMEM88-201ENST00000301599 IFIT1P09914 478 aaKnown RBP22.8■■□□□ 1.24
TMEM88-201ENST00000301599 PTPN12Q05209 780 aaKnown RBP22.8■■□□□ 1.24
TMEM88-201ENST00000301599 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
TMEM88-201ENST00000301599 RASAL3Q86YV0 1011 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 MIER1Q8N108 512 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 CSRNP1Q96S65 589 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 TTF2Q9UNY4 1162 aaKnown RBP22.8■■□□□ 1.24
TMEM88-201ENST00000301599 PCDHAC2Q9Y5I4 1007 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 A0A1B0GUL6 1792 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 KIF16BQ96L93 1317 aa22.8■■□□□ 1.24
TMEM88-201ENST00000301599 IPO8O15397 1037 aaKnown RBP22.79■■□□□ 1.24
TMEM88-201ENST00000301599 PUM3Q15397 648 aaKnown RBP22.79■■□□□ 1.24
TMEM88-201ENST00000301599 SERPINA10Q9UK55 444 aa22.79■■□□□ 1.24
TMEM88-201ENST00000301599 FBXO3Q9UK99 471 aa22.79■■□□□ 1.24
TMEM88-201ENST00000301599 PPP2R3BQ9Y5P8 575 aa22.79■■□□□ 1.24
TMEM88-201ENST00000301599 BCAMP50895 628 aa22.78■■□□□ 1.24
TMEM88-201ENST00000301599 TBC1D22AQ8WUA7 517 aa22.78■■□□□ 1.24
TMEM88-201ENST00000301599 SAGE1Q9NXZ1 904 aa22.78■■□□□ 1.24
TMEM88-201ENST00000301599 IQSEC3Q9UPP2 1182 aaPredicted RBP22.78■■□□□ 1.24
TMEM88-201ENST00000301599 PAPPA2Q9BXP8 1791 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 CLRN2A0PK11 232 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 FGFR2P21802 821 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 PRKG1Q13976 671 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 SUPT20HL1Q3ZLR7 823 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
TMEM88-201ENST00000301599 VEZTQ9HBM0 779 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 RNF186Q9NXI6 227 aa22.77■■□□□ 1.24
TMEM88-201ENST00000301599 TRPA1O75762 1119 aa22.76■■□□□ 1.23
TMEM88-201ENST00000301599 CHAF1AQ13111 956 aaPredicted RBP22.76■■□□□ 1.23
TMEM88-201ENST00000301599 ATG9AQ7Z3C6 839 aa22.76■■□□□ 1.23
TMEM88-201ENST00000301599 LPIN2Q92539 896 aa22.76■■□□□ 1.23
TMEM88-201ENST00000301599 LRRFIP2Q9Y608 721 aaKnown RBP22.76■■□□□ 1.23
TMEM88-201ENST00000301599 COL1A1P02452 1464 aaPredicted RBP22.75■■□□□ 1.23
TMEM88-201ENST00000301599 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
TMEM88-201ENST00000301599 CIAO1O76071 339 aa22.75■■□□□ 1.23
TMEM88-201ENST00000301599 GNAI3P08754 354 aa22.75■■□□□ 1.23
TMEM88-201ENST00000301599 SLC5A1P13866 664 aa22.75■■□□□ 1.23
TMEM88-201ENST00000301599 LDLRAD1Q5T700 205 aa22.75■■□□□ 1.23
TMEM88-201ENST00000301599 CEP126Q9P2H0 1117 aa22.75■■□□□ 1.23
TMEM88-201ENST00000301599 ANGEL1Q9UNK9 670 aaKnown RBP22.75■■□□□ 1.23
TMEM88-201ENST00000301599 HDLBPQ00341 1268 aaKnown RBP22.74■■□□□ 1.23
TMEM88-201ENST00000301599 DZIP1LQ8IYY4 767 aaKnown RBP22.74■■□□□ 1.23
TMEM88-201ENST00000301599 MEIS3Q99687 375 aa22.74■■□□□ 1.23
TMEM88-201ENST00000301599 MRIQ9BWK5 157 aa22.74■■□□□ 1.23
TMEM88-201ENST00000301599 SIL1Q9H173 461 aa22.74■■□□□ 1.23
TMEM88-201ENST00000301599 ZNF70Q9UC06 446 aaPredicted RBP22.74■■□□□ 1.23
TMEM88-201ENST00000301599 CRKP46108 304 aa22.73■■□□□ 1.23
TMEM88-201ENST00000301599 TNFAIP1Q13829 316 aa22.73■■□□□ 1.23
TMEM88-201ENST00000301599 RASA3Q14644 834 aa22.73■■□□□ 1.23
TMEM88-201ENST00000301599 SPDYE2Q495Y8 402 aa22.73■■□□□ 1.23
TMEM88-201ENST00000301599 TDRD3Q9H7E2 651 aaKnown RBP22.73■■□□□ 1.23
TMEM88-201ENST00000301599 BCAR3O75815 825 aa22.72■■□□□ 1.23
TMEM88-201ENST00000301599 IL15P40933 162 aaPredicted RBP22.72■■□□□ 1.23
TMEM88-201ENST00000301599 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms