RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DNTTIP2Q5QJE6 756 aaKnown RBP25.87■■□□□ 1.73
TPM4-201ENST00000300933 APPBP2Q92624 585 aa25.87■■□□□ 1.73
TPM4-201ENST00000300933 IQSEC3Q9UPP2 1182 aaPredicted RBP25.87■■□□□ 1.73
TPM4-201ENST00000300933 MCM5P33992 734 aa25.86■■□□□ 1.73
TPM4-201ENST00000300933 EXOSC10Q01780 885 aaKnown RBP25.86■■□□□ 1.73
TPM4-201ENST00000300933 WWC3Q9ULE0 1092 aa25.86■■□□□ 1.73
TPM4-201ENST00000300933 NKX2-3Q8TAU0 364 aa25.86■■□□□ 1.73
TPM4-201ENST00000300933 APPP05067 770 aa25.85■■□□□ 1.73
TPM4-201ENST00000300933 CCDC24Q8N4L8 307 aa25.85■■□□□ 1.73
TPM4-201ENST00000300933 LINC00116Q8NCU8 138 aa25.85■■□□□ 1.73
TPM4-201ENST00000300933 TAOK2Q9UL54 1235 aa25.85■■□□□ 1.73
TPM4-201ENST00000300933 C3orf67Q6ZVT6 689 aa25.84■■□□□ 1.73
TPM4-201ENST00000300933 MYH3P11055 1940 aa25.84■■□□□ 1.73
TPM4-201ENST00000300933 PUM3Q15397 648 aaKnown RBP25.84■■□□□ 1.73
TPM4-201ENST00000300933 TTC6Q86TZ1 520 aa25.84■■□□□ 1.73
TPM4-201ENST00000300933 TMEM87AQ8NBN3 555 aa25.84■■□□□ 1.73
TPM4-201ENST00000300933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.84■■□□□ 1.735e-7■■■□□ 18.3
TPM4-201ENST00000300933 MYO5AQ9Y4I1 1855 aaKnown RBP25.84■■□□□ 1.73
TPM4-201ENST00000300933 CTDNEP1O95476 244 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 BCAMP50895 628 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 UBE2HP62256 183 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 ZNF532Q9HCE3 1301 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 LAMA4Q16363 1823 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 WNK3Q9BYP7 1800 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 ZFYP08048 801 aaPredicted RBP25.83■■□□□ 1.73
TPM4-201ENST00000300933 GUCY1B3Q02153 619 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 BARGINQ6ZT62 677 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 TSC1Q92574 1164 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 ZNF830Q96NB3 372 aaPredicted RBP25.83■■□□□ 1.73
TPM4-201ENST00000300933 ANKRD36CQ5JPF3 1778 aa25.83■■□□□ 1.73
TPM4-201ENST00000300933 NRAPQ86VF7 1730 aa25.83■■□□□ 1.72
TPM4-201ENST00000300933 NTSR2O95665 410 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 PDCP20941 246 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 ADD2P35612 726 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 INCENPQ9NQS7 918 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 HMGB1P09429 215 aaKnown RBP25.82■■□□□ 1.72
TPM4-201ENST00000300933 CEBPZQ03701 1054 aaKnown RBP25.82■■□□□ 1.72
TPM4-201ENST00000300933 LPIN2Q92539 896 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 TSPY26PQ9H489 355 aa25.82■■□□□ 1.72
TPM4-201ENST00000300933 RASGRF1Q13972 1273 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 IMMTQ16891 758 aaKnown RBP25.81■■□□□ 1.72
TPM4-201ENST00000300933 FAM184AQ8NB25 1140 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 AKAP11Q9UKA4 1901 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 KIAA2012Q0VF49 1180 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 LRRFIP1Q32MZ4 808 aaKnown RBP25.81■■□□□ 1.72
TPM4-201ENST00000300933 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.81■■□□□ 1.722e-11■□□□□ 8.1
TPM4-201ENST00000300933 H3BQV1 296 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 FGFR2P21802 821 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 ERFEQ4G0M1 354 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 IFFO2Q5TF58 517 aa25.81■■□□□ 1.72
TPM4-201ENST00000300933 SYAP1Q96A49 352 aaPredicted RBP25.81■■□□□ 1.72
TPM4-201ENST00000300933 PDIA3P30101 505 aaKnown RBP25.8■■□□□ 1.72
TPM4-201ENST00000300933 GIMAP6Q6P9H5 292 aa25.8■■□□□ 1.72
TPM4-201ENST00000300933 NSUN7Q8NE18 718 aaKnown RBP25.8■■□□□ 1.72
TPM4-201ENST00000300933 PFKFB2O60825 505 aa25.8■■□□□ 1.72
TPM4-201ENST00000300933 PDE6AP16499 860 aa25.8■■□□□ 1.72
TPM4-201ENST00000300933 STK11IPQ8N1F8 1099 aa25.8■■□□□ 1.72
TPM4-201ENST00000300933 PTPDC1A2A3K4 754 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 ZNF213O14771 459 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 SPATA5Q8NB90 893 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 MROH5Q6ZUA9 1318 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 KRT85P78386 507 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 CCDC152Q4G0S7 254 aa25.79■■□□□ 1.72
TPM4-201ENST00000300933 MTERF4Q7Z6M4 381 aaKnown RBP25.79■■□□□ 1.72
TPM4-201ENST00000300933 CTNNA3Q9UI47 895 aa25.78■■□□□ 1.72
TPM4-201ENST00000300933 PRC1O43663 620 aa25.78■■□□□ 1.72
TPM4-201ENST00000300933 SLC5A1P13866 664 aa25.78■■□□□ 1.72
TPM4-201ENST00000300933 MAGEB6Q8N7X4 407 aa25.78■■□□□ 1.72
TPM4-201ENST00000300933 NBPF3Q9H094 633 aa25.78■■□□□ 1.72
TPM4-201ENST00000300933 SRP68Q9UHB9 627 aaKnown RBP25.78■■□□□ 1.72
TPM4-201ENST00000300933 IGHMBP2P38935 993 aaKnown RBP25.77■■□□□ 1.72
TPM4-201ENST00000300933 PARP10Q53GL7 1025 aa25.77■■□□□ 1.72
TPM4-201ENST00000300933 FTOQ9C0B1 505 aaKnown RBP eCLIP25.77■■□□□ 1.72
TPM4-201ENST00000300933 ARID4AP29374 1257 aaPredicted RBP25.77■■□□□ 1.72
TPM4-201ENST00000300933 COL4A1P02462 1669 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 CHRNDQ07001 517 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 CAMK4Q16566 473 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 CCDC183Q5T5S1 534 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 OTUD7BQ6GQQ9 843 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 C17orf53Q8N3J3 647 aaPredicted RBP25.76■■□□□ 1.71
TPM4-201ENST00000300933 KDM4AO75164 1064 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 ANTXR2P58335 489 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 SMARCC1Q92922 1105 aaPredicted RBP25.76■■□□□ 1.71
TPM4-201ENST00000300933 NWD2Q9ULI1 1742 aa25.76■■□□□ 1.71
TPM4-201ENST00000300933 LIG1P18858 919 aa25.75■■□□□ 1.71
TPM4-201ENST00000300933 GTF2E1P29083 439 aaPredicted RBP25.75■■□□□ 1.71
TPM4-201ENST00000300933 TTF1Q15361 905 aaPredicted RBP25.75■■□□□ 1.71
TPM4-201ENST00000300933 AMIGO3Q86WK7 504 aa25.75■■□□□ 1.71
TPM4-201ENST00000300933 TBC1D10CQ8IV04 446 aa25.75■■□□□ 1.71
TPM4-201ENST00000300933 AGXT2Q9BYV1 514 aa25.75■■□□□ 1.71
TPM4-201ENST00000300933 ZHX1Q9UKY1 873 aaPredicted RBP25.75■■□□□ 1.71
TPM4-201ENST00000300933 TAF1P21675 1872 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 RXRAP19793 462 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 SMAP1Q8IYB5 467 aaPredicted RBP25.74■■□□□ 1.71
TPM4-201ENST00000300933 SMARCC2Q8TAQ2 1214 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 AIDAQ96BJ3 306 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 SPATA32Q96LK8 384 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
TPM4-201ENST00000300933 RALYLQ86SE5 291 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms