RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DLGAP5Q15398 846 aa20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 DEFB129Q9H1M3 183 aa20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 ANGEL1Q9UNK9 670 aaKnown RBP20.33■□□□□ 0.85
TMEM41A-201ENST00000296254 IL1R1P14778 569 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 SPRYD7Q5W111 196 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 PPP2R3BQ9Y5P8 575 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 CENPFP49454 3210 aa20.32■□□□□ 0.84
TMEM41A-201ENST00000296254 FKBP1AP62942 108 aaKnown RBP20.31■□□□□ 0.84
TMEM41A-201ENST00000296254 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
TMEM41A-201ENST00000296254 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
TMEM41A-201ENST00000296254 PCDHAC2Q9Y5I4 1007 aa20.31■□□□□ 0.84
TMEM41A-201ENST00000296254 LAMB1P07942 1786 aa20.31■□□□□ 0.84
TMEM41A-201ENST00000296254 SPDYE2BA6NHP3 402 aa20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 GRM8O00222 908 aa20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 SPDYE6P0CI01 402 aa20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 MKI67P46013 3256 aaKnown RBP20.3■□□□□ 0.84
TMEM41A-201ENST00000296254 F8W031 263 aaPredicted RBP20.29■□□□□ 0.84
TMEM41A-201ENST00000296254 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
TMEM41A-201ENST00000296254 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
TMEM41A-201ENST00000296254 BRCA2P51587 3418 aa20.29■□□□□ 0.84
TMEM41A-201ENST00000296254 CLRN2A0PK11 232 aa20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 MYO1BO43795 1136 aa20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 ZBTB48P10074 688 aaPredicted RBP20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 CCDC57Q2TAC2 916 aa20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 FBXO46Q6PJ61 603 aaPredicted RBP20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
TMEM41A-201ENST00000296254 AOX1Q06278 1338 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 PPP1R12BO60237 982 aaPredicted RBP20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 FKTNO75072 461 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 ZNF594Q96JF6 807 aaPredicted RBP20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
TMEM41A-201ENST00000296254 WNK4Q96J92 1243 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 CLMNQ96JQ2 1002 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 PRMT6Q96LA8 375 aaPredicted RBP20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 VEZTQ9HBM0 779 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 ARAP2Q8WZ64 1704 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 FAM205AQ6ZU69 1335 aa20.26■□□□□ 0.83
TMEM41A-201ENST00000296254 UNCXA6NJT0 531 aa20.25■□□□□ 0.83
TMEM41A-201ENST00000296254 INHBEP58166 350 aa20.25■□□□□ 0.83
TMEM41A-201ENST00000296254 IFNL1Q8IU54 200 aa20.25■□□□□ 0.83
TMEM41A-201ENST00000296254 SLC10A4Q96EP9 437 aa20.25■□□□□ 0.83
TMEM41A-201ENST00000296254 PLIN1O60240 522 aa20.24■□□□□ 0.83
TMEM41A-201ENST00000296254 SUPT20HL1Q3ZLR7 823 aa20.24■□□□□ 0.83
TMEM41A-201ENST00000296254 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
TMEM41A-201ENST00000296254 IGF2BP3O00425 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 NBPF12Q5TAG4 269 aaPredicted RBP20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 PRPF38BQ5VTL8 546 aaKnown RBP20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 OTOFQ9HC10 1997 aa20.23■□□□□ 0.83
TMEM41A-201ENST00000296254 ANP32CO43423 234 aa20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 IREB2P48200 963 aaKnown RBP20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 RBM5P52756 815 aaKnown RBP eCLIP20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 RASA3Q14644 834 aa20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 TDRD7Q8NHU6 1098 aaKnown RBP20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 SRCIN1Q9C0H9 1055 aa20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 SERPINA10Q9UK55 444 aa20.22■□□□□ 0.83
TMEM41A-201ENST00000296254 GYG1P46976 350 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
TMEM41A-201ENST00000296254 HIBADHP31937 336 aaKnown RBP20.2■□□□□ 0.82
TMEM41A-201ENST00000296254 GJA5P36382 358 aa20.2■□□□□ 0.82
TMEM41A-201ENST00000296254 ANKRD13AQ8IZ07 590 aa20.2■□□□□ 0.82
TMEM41A-201ENST00000296254 TTF2Q9UNY4 1162 aaKnown RBP20.2■□□□□ 0.82
TMEM41A-201ENST00000296254 USP2O75604 605 aaPredicted RBP20.19■□□□□ 0.82
TMEM41A-201ENST00000296254 FAM84BQ96KN1 310 aaPredicted RBP20.19■□□□□ 0.82
TMEM41A-201ENST00000296254 PUS3Q9BZE2 481 aaKnown RBP20.19■□□□□ 0.82
TMEM41A-201ENST00000296254 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
TMEM41A-201ENST00000296254 UTYO14607 1347 aa20.19■□□□□ 0.82
TMEM41A-201ENST00000296254 NBPF7P0C2Y1 421 aaPredicted RBP20.18■□□□□ 0.82
TMEM41A-201ENST00000296254 OTOP1Q7RTM1 612 aa20.18■□□□□ 0.82
TMEM41A-201ENST00000296254 ZNF70Q9UC06 446 aaPredicted RBP20.18■□□□□ 0.82
TMEM41A-201ENST00000296254 MROH5Q6ZUA9 1318 aa20.18■□□□□ 0.82
TMEM41A-201ENST00000296254 CRHR2Q13324 411 aa20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 RABL6Q3YEC7 729 aaPredicted RBP20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 CDAN1Q8IWY9 1227 aa20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 TEPSINQ96N21 525 aa20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 TDRD3Q9H7E2 651 aaKnown RBP20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 RIPOR2Q9Y4F9 1068 aa20.17■□□□□ 0.82
TMEM41A-201ENST00000296254 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
TMEM41A-201ENST00000296254 CRKP46108 304 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms