RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CASTP20810 708 aaKnown RBP27.35■■□□□ 1.97
PTX3-201ENST00000295927 ZNF532Q9HCE3 1301 aa27.34■■□□□ 1.97
PTX3-201ENST00000295927 MAP3K12Q12852 859 aa27.34■■□□□ 1.97
PTX3-201ENST00000295927 DEFB132Q7Z7B7 95 aa27.34■■□□□ 1.97
PTX3-201ENST00000295927 TAF6LQ9Y6J9 622 aa27.34■■□□□ 1.97
PTX3-201ENST00000295927 COL1A1P02452 1464 aaPredicted RBP27.34■■□□□ 1.97
PTX3-201ENST00000295927 XDHP47989 1333 aa27.34■■□□□ 1.97
PTX3-201ENST00000295927 TCRBV5S4A2TA0A5A2 114 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 BBOX1O75936 387 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 TSGA10IPQ3SY00 556 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 TTC14Q96N46 770 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 ZSWIM6Q9HCJ5 1215 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 FOXD4L1Q9NU39 408 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 LEMD3Q9Y2U8 911 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 IRS2Q9Y4H2 1338 aa27.33■■□□□ 1.97
PTX3-201ENST00000295927 HIBADHP31937 336 aaKnown RBP27.33■■□□□ 1.97
PTX3-201ENST00000295927 RPAP1Q9BWH6 1393 aaPredicted RBP27.32■■□□□ 1.96
PTX3-201ENST00000295927 CPA1P15085 419 aa27.32■■□□□ 1.96
PTX3-201ENST00000295927 DENND2AQ9ULE3 1009 aa27.32■■□□□ 1.96
PTX3-201ENST00000295927 GPAA1O43292 621 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 SEMA3EO15041 775 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 CYP21A2P08686 494 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 DDIT3P35638 169 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 GPSM2P81274 684 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 TXNRD3Q86VQ6 643 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 MAGEB6Q8N7X4 407 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 CYP46A1Q9Y6A2 500 aa27.31■■□□□ 1.96
PTX3-201ENST00000295927 PSMA5P28066 241 aa27.3■■□□□ 1.96
PTX3-201ENST00000295927 TMX3Q96JJ7 454 aa27.3■■□□□ 1.96
PTX3-201ENST00000295927 FOXP2O15409 715 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 SRGNP10124 158 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 NOL8Q76FK4 1167 aaKnown RBP27.29■■□□□ 1.96
PTX3-201ENST00000295927 RUFY3Q7L099 469 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 LRP2BPQ9P2M1 347 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 COL11A2P13942 1736 aaPredicted RBP27.29■■□□□ 1.96
PTX3-201ENST00000295927 PDE6BP35913 854 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 CHMP5Q9NZZ3 219 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 LRRC37AA6NMS7 1700 aa27.29■■□□□ 1.96
PTX3-201ENST00000295927 KRT32Q14532 448 aa27.28■■□□□ 1.96
PTX3-201ENST00000295927 NSFL1CQ9UNZ2 370 aaKnown RBP27.28■■□□□ 1.96
PTX3-201ENST00000295927 FRAT2O75474 233 aaPredicted RBP27.28■■□□□ 1.96
PTX3-201ENST00000295927 NPR1P16066 1061 aa27.28■■□□□ 1.96
PTX3-201ENST00000295927 AK2P54819 239 aa27.28■■□□□ 1.96
PTX3-201ENST00000295927 PDRG1Q9NUG6 133 aa27.28■■□□□ 1.96
PTX3-201ENST00000295927 ABCF2Q9UG63 623 aa27.28■■□□□ 1.96
PTX3-201ENST00000295927 PDS5AQ29RF7 1337 aaKnown RBP27.27■■□□□ 1.96
PTX3-201ENST00000295927 COL9A3Q14050 684 aaPredicted RBP27.26■■□□□ 1.95
PTX3-201ENST00000295927 TMC4Q7Z404 712 aa27.26■■□□□ 1.95
PTX3-201ENST00000295927 PPEF1O14829 653 aaPredicted RBP27.26■■□□□ 1.95
PTX3-201ENST00000295927 ATP2B4P23634 1241 aa27.26■■□□□ 1.95
PTX3-201ENST00000295927 BLOC1S2Q6QNY1 142 aa27.26■■□□□ 1.95
PTX3-201ENST00000295927 C15orf52Q6ZUT6 534 aaKnown RBP27.26■■□□□ 1.95
PTX3-201ENST00000295927 ANP32EQ9BTT0 268 aa27.26■■□□□ 1.95
PTX3-201ENST00000295927 LAMA4Q16363 1823 aa27.25■■□□□ 1.95
PTX3-201ENST00000295927 A0A0G2JLW4 131 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 ZBTB22O15209 634 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 UFL1O94874 794 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 TTLL5Q6EMB2 1281 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 SP8Q8IXZ3 490 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 AIDAQ96BJ3 306 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 GPR101Q96P66 508 aaPredicted RBP27.24■■□□□ 1.95
PTX3-201ENST00000295927 PODXL2Q9NZ53 605 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 CTNNA3Q9UI47 895 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 GGA1Q9UJY5 639 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 LTBP1Q14766 1721 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 FGAP02671 866 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 RPS6KB1P23443 525 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 CUL4AQ13619 759 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 NEK1Q96PY6 1258 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 STRBPQ96SI9 672 aaKnown RBP27.24■■□□□ 1.95
PTX3-201ENST00000295927 RAI14Q9P0K7 980 aa27.24■■□□□ 1.95
PTX3-201ENST00000295927 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
PTX3-201ENST00000295927 ALDH1B1P30837 517 aa27.23■■□□□ 1.95
PTX3-201ENST00000295927 MASTLQ96GX5 879 aa27.23■■□□□ 1.95
PTX3-201ENST00000295927 CIZ1Q9ULV3 898 aaPredicted RBP27.23■■□□□ 1.95
PTX3-201ENST00000295927 STOX1Q6ZVD7 989 aa27.22■■□□□ 1.95
PTX3-201ENST00000295927 LIMCH1Q9UPQ0 1083 aa27.22■■□□□ 1.95
PTX3-201ENST00000295927 MBD4O95243 580 aa27.22■■□□□ 1.95
PTX3-201ENST00000295927 CHAF1AQ13111 956 aaPredicted RBP27.22■■□□□ 1.95
PTX3-201ENST00000295927 PDGFDQ9GZP0 370 aaPredicted RBP27.22■■□□□ 1.95
PTX3-201ENST00000295927 ATP6V0A2Q9Y487 856 aa27.22■■□□□ 1.95
PTX3-201ENST00000295927 CYP7A1P22680 504 aa27.21■■□□□ 1.95
PTX3-201ENST00000295927 NBR1Q14596 966 aa27.21■■□□□ 1.95
PTX3-201ENST00000295927 ZNF804AQ7Z570 1209 aa27.21■■□□□ 1.95
PTX3-201ENST00000295927 ZGPATQ8N5A5 531 aaKnown RBP27.21■■□□□ 1.95
PTX3-201ENST00000295927 LARP6Q9BRS8 491 aaKnown RBP27.21■■□□□ 1.95
PTX3-201ENST00000295927 TDRD7Q8NHU6 1098 aaKnown RBP27.2■■□□□ 1.95
PTX3-201ENST00000295927 TBC1D16Q8TBP0 767 aa27.2■■□□□ 1.95
PTX3-201ENST00000295927 POLLQ9UGP5 575 aa27.2■■□□□ 1.95
PTX3-201ENST00000295927 IMMTQ16891 758 aaKnown RBP27.2■■□□□ 1.94
PTX3-201ENST00000295927 ALDH8A1Q9H2A2 487 aaPredicted RBP27.2■■□□□ 1.94
PTX3-201ENST00000295927 ARMT1Q9H993 441 aa27.2■■□□□ 1.94
PTX3-201ENST00000295927 C2CD5Q86YS7 1000 aa27.19■■□□□ 1.94
PTX3-201ENST00000295927 TCEANC2Q96MN5 208 aa27.19■■□□□ 1.94
PTX3-201ENST00000295927 CCDC88AQ3V6T2 1871 aa27.19■■□□□ 1.94
PTX3-201ENST00000295927 E7EWF7 191 aa27.18■■□□□ 1.94
PTX3-201ENST00000295927 NFKBIBQ15653 356 aa27.18■■□□□ 1.94
PTX3-201ENST00000295927 ADGRA1Q86SQ6 560 aa27.18■■□□□ 1.94
PTX3-201ENST00000295927 CWC22Q9HCG8 908 aaKnown RBP27.18■■□□□ 1.94
PTX3-201ENST00000295927 APPP05067 770 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms