RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MAST3O60307 1309 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 NBPF26B4DH59 902 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 PDIA3P30101 505 aaKnown RBP18.45■□□□□ 0.54
SMAD6-201ENST00000288840 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 CEP135Q66GS9 1140 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 NBPF10Q6P3W6 841 aaKnown RBP18.45■□□□□ 0.54
SMAD6-201ENST00000288840 NBPF15Q8N660 670 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 CNNM3Q8NE01 707 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 DIP2BQ9P265 1576 aa18.45■□□□□ 0.54
SMAD6-201ENST00000288840 SYKP43405 635 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 CTAGE5O15320 804 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 RANBP6O60518 1105 aaKnown RBP18.44■□□□□ 0.54
SMAD6-201ENST00000288840 MYRIPQ8NFW9 859 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 CLIC4Q9Y696 253 aa18.44■□□□□ 0.54
SMAD6-201ENST00000288840 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 ZBTB43O43298 467 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 MAGEB6Q8N7X4 407 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
SMAD6-201ENST00000288840 NACAP1Q9BZK3 213 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 AP5Z1O43299 807 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 U2AF2P26368 475 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMAD6-201ENST00000288840 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 FAM160A1Q05DH4 1040 aa18.43■□□□□ 0.54
SMAD6-201ENST00000288840 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 RAD21O60216 631 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 TMEM87AQ8NBN3 555 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 MAP3K12Q12852 859 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 SCARF1Q14162 830 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 GREM2Q9H772 168 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
SMAD6-201ENST00000288840 PFKFB2O60825 505 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 CDKL5O76039 1030 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
SMAD6-201ENST00000288840 ARMT1Q9H993 441 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 NDUFA8P51970 172 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 RESTQ13127 1097 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 PXDNQ92626 1479 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 NAA30Q147X3 362 aaPredicted RBP18.41■□□□□ 0.54
SMAD6-201ENST00000288840 CCDC34Q96HJ3 373 aa18.41■□□□□ 0.54
SMAD6-201ENST00000288840 MBD4O95243 580 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 PCDH11XQ9BZA7 1347 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 PCDH11YQ9BZA8 1340 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 PRDM1O75626 825 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 URI1O94763 535 aaPredicted RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 DZIP3Q86Y13 1208 aaKnown RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 SSRP1Q08945 709 aaKnown RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 KIAA1524Q8TCG1 905 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 APPBP2Q92624 585 aa18.4■□□□□ 0.54
SMAD6-201ENST00000288840 HOOK1Q9UJC3 728 aaKnown RBP18.4■□□□□ 0.54
SMAD6-201ENST00000288840 EXOC5O00471 708 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 AFMP43652 599 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 TCIRG1Q13488 830 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 KIF18AQ8NI77 898 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 ZSWIM4Q9H7M6 989 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 KCNJ14Q9UNX9 436 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.54
SMAD6-201ENST00000288840 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
SMAD6-201ENST00000288840 CLIC6Q96NY7 704 aa18.39■□□□□ 0.53
SMAD6-201ENST00000288840 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
SMAD6-201ENST00000288840 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
SMAD6-201ENST00000288840 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
SMAD6-201ENST00000288840 ZNF202O95125 648 aa18.38■□□□□ 0.53
SMAD6-201ENST00000288840 PHKA1P46020 1223 aa18.38■□□□□ 0.53
SMAD6-201ENST00000288840 UBASH3AP57075 661 aa18.38■□□□□ 0.53
SMAD6-201ENST00000288840 GOLPH3LQ9H4A5 285 aa18.38■□□□□ 0.53
SMAD6-201ENST00000288840 ZNF609O15014 1411 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
SMAD6-201ENST00000288840 SLC5A1P13866 664 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 STX17P56962 302 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 GOLGA8FQ08AF8 430 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 GOLGA8DPQ0D2H9 430 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
SMAD6-201ENST00000288840 KCNF1Q9H3M0 494 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 SMTNL1A8MU46 457 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 DPCR1Q3MIW9 517 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
SMAD6-201ENST00000288840 HLFQ16534 295 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
SMAD6-201ENST00000288840 LLPHQ9BRT6 129 aaKnown RBP18.36■□□□□ 0.53
SMAD6-201ENST00000288840 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
SMAD6-201ENST00000288840 MYSM1Q5VVJ2 828 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 DNAI1Q9UI46 699 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 CYP7A1P22680 504 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 FOXO4P98177 505 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms