RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 AP5Z1O43299 807 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 AKAP17AQ02040 695 aaKnown RBP16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
LPCAT1-201ENST00000283415 HAUS7Q99871 368 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 PI16Q6UXB8 463 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 PDILTQ8N807 584 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
LPCAT1-201ENST00000283415 TNNT1P13805 278 aa16.08■□□□□ 0.17
LPCAT1-201ENST00000283415 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.17
LPCAT1-201ENST00000283415 GPR108Q9NPR9 543 aa16.08■□□□□ 0.17
LPCAT1-201ENST00000283415 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.17
LPCAT1-201ENST00000283415 MCMDC2Q4G0Z9 681 aa16.08■□□□□ 0.16
LPCAT1-201ENST00000283415 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
LPCAT1-201ENST00000283415 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
LPCAT1-201ENST00000283415 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
LPCAT1-201ENST00000283415 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
LPCAT1-201ENST00000283415 A0A1B0GUL7 405 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 KRT32Q14532 448 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 NBPF15Q8N660 670 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 TDO2P48775 406 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 SNAP23O00161 211 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 LIG1P18858 919 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
LPCAT1-201ENST00000283415 LRMPQ12912 555 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 DYNC1I1O14576 645 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 TPM4P67936 248 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 C8orf76Q96K31 380 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 ZKSCAN3Q9BRR0 538 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 ZNF213O14771 459 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 STARD3NLO95772 234 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 ORC3Q9UBD5 711 aaPredicted RBP16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 A0A1B0GUL6 1792 aa16.06■□□□□ 0.16
LPCAT1-201ENST00000283415 LAMB2P55268 1798 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 ADD1P35611 737 aaKnown RBP16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 CCAR1Q8IX12 1150 aaKnown RBP16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 MYL10Q9BUA6 226 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 RAI14Q9P0K7 980 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 MYO5AQ9Y4I1 1855 aaKnown RBP16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 KCNQ4P56696 695 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 TYRO3Q06418 890 aa16.05■□□□□ 0.16
LPCAT1-201ENST00000283415 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 ERICH2A1L162 156 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 EVCP57679 992 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 EXOSC10Q01780 885 aaKnown RBP16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
LPCAT1-201ENST00000283415 FOXP2O15409 715 aa16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 PTPDC1A2A3K4 754 aa16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
LPCAT1-201ENST00000283415 A0A1B0GVL5 298 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 RESTQ13127 1097 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 ZNF396Q96N95 335 aaPredicted RBP16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 NUP98P52948 1817 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 ADORA1P30542 326 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 BTG4Q9NY30 223 aa16.02■□□□□ 0.16
LPCAT1-201ENST00000283415 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.15
LPCAT1-201ENST00000283415 SKIDA1Q1XH10 827 aa16.02■□□□□ 0.15
LPCAT1-201ENST00000283415 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.151e-7■■■■□ 24.6
LPCAT1-201ENST00000283415 CYP21A2P08686 494 aa16.02■□□□□ 0.15
LPCAT1-201ENST00000283415 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.15
LPCAT1-201ENST00000283415 PYCARDQ9ULZ3 195 aa16.02■□□□□ 0.15
LPCAT1-201ENST00000283415 SLIT2O94813 1529 aa16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
LPCAT1-201ENST00000283415 NAPBQ9H115 298 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms