RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PRKCSHP14314 528 aaPredicted RBP17.67■□□□□ 0.42
TIMP3-201ENST00000266085 IBSPP21815 317 aaPredicted RBP17.67■□□□□ 0.42
TIMP3-201ENST00000266085 NAPAP54920 295 aa17.67■□□□□ 0.42
TIMP3-201ENST00000266085 GOLGA6L10A6NI86 522 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 TEX11Q8IYF3 940 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 ERBB3P21860 1342 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 BEND3Q5T5X7 828 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 PAF1Q8N7H5 531 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 SCLT1Q96NL6 688 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 SAMM50Q9Y512 469 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
TIMP3-201ENST00000266085 TMC6Q7Z403 805 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
TIMP3-201ENST00000266085 B4E1Z4 1266 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 YEATS4O95619 227 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 PAXIP1Q6ZW49 1069 aaPredicted RBP17.65■□□□□ 0.42
TIMP3-201ENST00000266085 TRIM75PA6NK02 468 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 EIF3JO75822 258 aaKnown RBP17.65■□□□□ 0.42
TIMP3-201ENST00000266085 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
TIMP3-201ENST00000266085 KIF1BO60333 1816 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 CALML3P27482 149 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 KIF4BQ2VIQ3 1234 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 LRRC27Q9C0I9 530 aa17.65■□□□□ 0.42
TIMP3-201ENST00000266085 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 SPTLC2O15270 562 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 URI1O94763 535 aaPredicted RBP17.64■□□□□ 0.41
TIMP3-201ENST00000266085 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 EDC3Q96F86 508 aaKnown RBP17.64■□□□□ 0.41
TIMP3-201ENST00000266085 CDC42BPAQ5VT25 1732 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 RTL9Q8NET4 1388 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 SLC27A2O14975 620 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 ZAP70P43403 619 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
TIMP3-201ENST00000266085 APBA3O96018 575 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 RPS8P62241 208 aaKnown RBP17.64■□□□□ 0.41
TIMP3-201ENST00000266085 CCDC40Q4G0X9 1142 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 FAM200AQ8TCP9 573 aa17.64■□□□□ 0.41
TIMP3-201ENST00000266085 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
TIMP3-201ENST00000266085 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 SYT1P21579 422 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 AFMP43652 599 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 SIK1P57059 783 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
TIMP3-201ENST00000266085 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
TIMP3-201ENST00000266085 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 PRDM1O75626 825 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 ENOX2Q16206 610 aaKnown RBP17.63■□□□□ 0.41
TIMP3-201ENST00000266085 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 CETN1Q12798 172 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 RMND1Q9NWS8 449 aa17.63■□□□□ 0.41
TIMP3-201ENST00000266085 STXBP4Q6ZWJ1 553 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 DESP17661 470 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 KDRP35968 1356 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
TIMP3-201ENST00000266085 RPS6KB1P23443 525 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
TIMP3-201ENST00000266085 MROH5Q6ZUA9 1318 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 SYNMO15061 1565 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 N4BP3O15049 544 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 TNNT1P13805 278 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 ATP5JP18859 108 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 ERMNQ8TAM6 284 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 C16orf45Q96MC5 204 aaPredicted RBP17.62■□□□□ 0.41
TIMP3-201ENST00000266085 C6orf50Q9HD87 102 aa17.62■□□□□ 0.41
TIMP3-201ENST00000266085 CTSWP56202 376 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 JAKMIP3Q5VZ66 844 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 TRIM47Q96LD4 638 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 TET3O43151 1660 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 LIG1P18858 919 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 CWC15Q9P013 229 aaKnown RBP17.61■□□□□ 0.41
TIMP3-201ENST00000266085 STAT6P42226 847 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
TIMP3-201ENST00000266085 DPP8Q6V1X1 898 aaPredicted RBP17.61■□□□□ 0.41
TIMP3-201ENST00000266085 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
TIMP3-201ENST00000266085 CETN2P41208 172 aa17.6■□□□□ 0.41
TIMP3-201ENST00000266085 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
TIMP3-201ENST00000266085 SPATA5Q8NB90 893 aa17.6■□□□□ 0.41
TIMP3-201ENST00000266085 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
TIMP3-201ENST00000266085 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
TIMP3-201ENST00000266085 RRP36Q96EU6 259 aaKnown RBP17.6■□□□□ 0.41
TIMP3-201ENST00000266085 EXOC1Q9NV70 894 aa17.6■□□□□ 0.41
TIMP3-201ENST00000266085 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
TIMP3-201ENST00000266085 TNNI2P48788 182 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 LEKR1Q6ZMV7 388 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 AATFQ9NY61 560 aaKnown RBP eCLIP17.59■□□□□ 0.41
TIMP3-201ENST00000266085 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
TIMP3-201ENST00000266085 H0YIN7 160 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms