RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
SCAP-201ENST00000265565 TRIM47Q96LD4 638 aa18.98■□□□□ 0.63
SCAP-201ENST00000265565 TRIM21P19474 475 aaKnown RBP18.98■□□□□ 0.63
SCAP-201ENST00000265565 GCKRQ14397 625 aa18.98■□□□□ 0.63
SCAP-201ENST00000265565 TRIM75PA6NK02 468 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 TAX1BP1Q86VP1 789 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 METTL22Q9BUU2 404 aaPredicted RBP18.97■□□□□ 0.63
SCAP-201ENST00000265565 VPS18Q9P253 973 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 B4E1Z4 1266 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 HELLSQ9NRZ9 838 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 SEPT11Q9NVA2 429 aaKnown RBP18.97■□□□□ 0.63
SCAP-201ENST00000265565 CACTINQ8WUQ7 758 aaKnown RBP18.97■□□□□ 0.63
SCAP-201ENST00000265565 MYO6Q9UM54 1294 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 GUCA1BQ9UMX6 200 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 FAM135BQ49AJ0 1406 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 CTAGE9A4FU28 777 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 MCM3P25205 808 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 ELP1O95163 1332 aa18.97■□□□□ 0.63
SCAP-201ENST00000265565 PPP2R3AQ06190 1150 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
SCAP-201ENST00000265565 ERLIN2O94905 339 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 KRI1Q8N9T8 703 aaKnown RBP18.96■□□□□ 0.63
SCAP-201ENST00000265565 CCDC191Q8NCU4 936 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 LRRC8AQ8IWT6 810 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 PHKBQ93100 1093 aa18.96■□□□□ 0.63
SCAP-201ENST00000265565 MAP4K1Q92918 833 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 MYL10Q9BUA6 226 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 KCNH3Q9ULD8 1083 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 TSPY2A6NKD2 308 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 AKR1B10O60218 316 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 KRT23Q9C075 422 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 EYA2O00167 538 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 GABPB1Q06547 395 aaPredicted RBP18.95■□□□□ 0.62
SCAP-201ENST00000265565 C10orf67Q8IYJ2 551 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
SCAP-201ENST00000265565 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
SCAP-201ENST00000265565 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 CYP7A1P22680 504 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 USP8P40818 1118 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 NUTM2AQ8IVF1 878 aaPredicted RBP18.94■□□□□ 0.62
SCAP-201ENST00000265565 MIGA1Q8NAN2 632 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 CAPZA3Q96KX2 299 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 FAM107BQ9H098 131 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 MYOM2P54296 1465 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 HLTFQ14527 1009 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCAP-201ENST00000265565 FTOQ9C0B1 505 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCAP-201ENST00000265565 KIAA1468Q9P260 1216 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCAP-201ENST00000265565 E7EWF7 191 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 TCP11L1Q9NUJ3 509 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
SCAP-201ENST00000265565 ATP5JP18859 108 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 CCT6AP40227 531 aaKnown RBP18.93■□□□□ 0.62
SCAP-201ENST00000265565 CEP112Q8N8E3 955 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 ZNF496Q96IT1 587 aaPredicted RBP18.93■□□□□ 0.62
SCAP-201ENST00000265565 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 NFE2L3Q9Y4A8 694 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 MYO1BO43795 1136 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 BCCIPQ9P287 314 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCAP-201ENST00000265565 POLR2DO15514 142 aaKnown RBP18.93■□□□□ 0.62
SCAP-201ENST00000265565 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
SCAP-201ENST00000265565 PROSER3Q2NL68 480 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 RNF187Q5TA31 235 aaPredicted RBP18.93■□□□□ 0.62
SCAP-201ENST00000265565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCAP-201ENST00000265565 ESR2Q92731 530 aa18.93■□□□□ 0.62
SCAP-201ENST00000265565 NLRP12P59046 1061 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 ZNF444Q8N0Y2 327 aaPredicted RBP18.92■□□□□ 0.62
SCAP-201ENST00000265565 SPAG1Q07617 926 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 SYCP1Q15431 976 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 DZIP1Q86YF9 867 aaKnown RBP18.92■□□□□ 0.62
SCAP-201ENST00000265565 TMTC2Q8N394 836 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 CNNM2Q9H8M5 875 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 IMPACTQ9P2X3 320 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 MTX1Q13505 466 aa18.92■□□□□ 0.62
SCAP-201ENST00000265565 IFIT1BQ5T764 474 aaKnown RBP18.92■□□□□ 0.62
SCAP-201ENST00000265565 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
SCAP-201ENST00000265565 AKR1B15C9JRZ8 316 aaPredicted RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 GPAA1O43292 621 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 MYSM1Q5VVJ2 828 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 ZNF589Q86UQ0 364 aaPredicted RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 SEC63Q9UGP8 760 aaKnown RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 STX8Q9UNK0 236 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 ANGEL1Q9UNK9 670 aaKnown RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 CTDP1Q9Y5B0 961 aaPredicted RBP18.91■□□□□ 0.62
SCAP-201ENST00000265565 TAF5LO75529 589 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 STAT6P42226 847 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 CCDC96Q2M329 555 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 KRT40Q6A162 431 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 IGSF22Q8N9C0 903 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 PCDHA7Q9UN72 937 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 ADALQ6DHV7 355 aa18.91■□□□□ 0.62
SCAP-201ENST00000265565 MAPK8IP1Q9UQF2 711 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms