RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 AKR1B10O60218 316 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 IGHDP01880 384 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 SLC5A1P13866 664 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CACNA2D3Q8IZS8 1091 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 FAM71BQ8TC56 605 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CAVIN4Q5BKX8 364 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CCDC65Q8IXS2 484 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 TTC14Q96N46 770 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 TSGA10Q9BZW7 698 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 MICAL3Q7RTP6 2002 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 IFIT3O14879 490 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 ACRBPQ8NEB7 543 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 RNF123Q5XPI4 1314 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 UBA7P41226 1012 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 PSMD7P51665 324 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 SEMA3FQ13275 785 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 CEP63Q96MT8 703 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 VCX3BQ9H321 246 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 VCX3AQ9NNX9 186 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 NINQ8N4C6 2090 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 ZFYVE9O95405 1425 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 USP5P45974 858 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 PPP1R42Q7Z4L9 355 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 TACC1O75410 805 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 MRPS27Q92552 414 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 NUDT16Q96DE0 195 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 MYO5CQ9NQX4 1742 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 TRIM66O15016 1216 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 SYT1P21579 422 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 PPFIA1Q13136 1202 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 DYNC1I2Q13409 638 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 ERCC6LQ2NKX8 1250 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 PBRM1Q86U86 1689 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 CCT2P78371 535 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 MUM1L1Q5H9M0 696 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 KRT23Q9C075 422 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 GCFC2P16383 781 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 CHMP4BP1P59074 171 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 PNMA8AQ86V59 439 aaPredicted RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 ESYT1Q9BSJ8 1104 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 PNMA6AP0CW24 399 aaPredicted RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 SESN3P58005 492 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 KRT83P78385 493 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 THUMPD2Q9BTF0 503 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 GRIN2AQ12879 1464 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 ISM2Q6H9L7 571 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 ZFXP17010 805 aaPredicted RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 SLMAPQ14BN4 828 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 CPLX4Q7Z7G2 160 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 STRN4Q9NRL3 753 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 EGFL6Q8IUX8 553 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 IKBKGQ9Y6K9 419 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 RP1P56715 2156 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 SHANK2Q9UPX8 1470 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 ELF1P32519 619 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 METAP2P50579 478 aaKnown RBP eCLIP6.42□□□□□ -1.38
VCAN-201ENST00000265077 PPFIBP2Q8ND30 876 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 TTC41PQ6P2S7 1318 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 ADGRL1O94910 1474 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 KDM5BQ9UGL1 1544 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 GOLGA8AA7E2F4 631 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 BIN1O00499 593 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 NOP2P46087 812 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 DDX46Q7L014 1031 aaKnown RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 CNPY2Q9Y2B0 182 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
VCAN-201ENST00000265077 F13A1P00488 732 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 EHMT1Q9H9B1 1298 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 FAM114A2Q9NRY5 505 aa6.42□□□□□ -1.38
VCAN-201ENST00000265077 TMEM67Q5HYA8 995 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 NUTM2AQ8IVF1 878 aaPredicted RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 CCDC77Q9BR77 488 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 IQCGQ9H095 443 aaKnown RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 DISP3Q9P2K9 1392 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 PSMA7O14818 248 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 UHRF1BP1Q6BDS2 1440 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 MFSD6Q6ZSS7 791 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 BSDC1Q9NW68 430 aaPredicted RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 AOX1Q06278 1338 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 MYH8P13535 1937 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 PSMC4P43686 418 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 CAPRIN2Q6IMN6 1127 aaKnown RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 TOM1L2Q6ZVM7 507 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 NAP1L3Q99457 506 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms